Candidatus Chromulinivorax destructor: C0J27_04695
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Entry
C0J27_04695 CDS
T08204
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cdes
Candidatus Chromulinivorax destructor
Pathway
cdes03410
Base excision repair
cdes03430
Mismatch repair
cdes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C0J27_04695 (recJ)
03430 Mismatch repair
C0J27_04695 (recJ)
03440 Homologous recombination
C0J27_04695 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdes03400
]
C0J27_04695 (recJ)
DNA repair and recombination proteins [BR:
cdes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
C0J27_04695 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C0J27_04695 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C0J27_04695 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AXK61002
UniProt:
A0A345ZCI5
LinkDB
All DBs
Position
956354..958105
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AA seq
583 aa
AA seq
DB search
MQQSMIQGKKYLWKLPQTDHDIVMKIAADYNLSFPLAQTLVARGFIEKEQLQDFILVSKE
KSVHDPALMKDAKKAVDRLITAIELQEKILIFGDYDVDGITSSSLVMIAMQPLGAQINFF
LPNRARDGYGLSVKIVERAAENGYKIIMTVDNGTTAFAATARAKELGIDVIITDHHRPHG
HIPEVFALVNPHQEDCNYPYKYFAGVGVAFKLMSLLYQEKKLELPTKVIELLLLGTVADV
VPLTGENRYWVRYGLAHINKHESYAIKVLKDNNKFVKPMIGSLDIGFTITPQINALGRLD
DPRQGVKFLIGGDEPETDRIGKVLWQLNQARKDIELDIFQEVKAKIESNAIDLSKENIII
AASANWQTGVIGLVASRLVSAYGKPTLLFHLTKDGVAKGSCRSIPEFSIFDGLVESGHLL
ESFGGHAQAAGLAIKVEHLPQLKENLEKKIAAELTELDLVQKLRIDAYAKLPDFSNKFIA
DMAHLEPFGHQNSQPYFYIKDVVLVQRPTLMKDLHIKCVVFADGVIKSLIFFNRPELFEA
LVMQGDETFDIVAQVMQNYWNGKCTVELQGVDIARLRQIEENL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaatctatgattcaaggcaaaaaatatttgtggaaactcccacagaccgatcat
gatattgtcatgaaaatcgctgctgactataatttatcattcccgctagcacaaacatta
gttgcacgtggttttatcgaaaaagagcagctgcaagactttatcttagtttctaaagaa
aaaagtgttcatgacccagcgcttatgaaagatgcaaaaaaagctgttgatcgattaatt
acagcaattgaactacaagaaaaaattcttatttttggcgactatgacgttgatggtatt
acttcatcatcgctggtcatgattgctatgcagccacttggtgctcagattaactttttc
ttaccaaatcgtgctcgtgatgggtatgggttatcggtaaaaattgttgaacgtgctgca
gaaaatgggtacaaaattattatgacggtggataacggaacaacagcctttgctgcaact
gcgcgagcaaaagaacttggtatcgacgttattatcaccgatcatcaccgtccgcatgga
catattccagaagtatttgcgttagttaacccgcatcaagaagattgcaactatccgtat
aaatattttgcaggcgttggtgttgcattcaaactgatgtcgctgttgtaccaagaaaaa
aaattagaactaccaaccaaagtgattgaactgttactgcttggtaccgttgctgacgtt
gtgccattgaccggcgaaaatcggtattgggttcggtatggacttgcccacatcaacaag
cacgaaagttatgcaattaaagtcttaaaagacaacaataaatttgtaaaaccgatgatc
ggttcgcttgatattgggtttacgattaccccacaaattaacgcgcttggccgtcttgat
gatccaagacaaggagttaagtttttaattggtggcgatgagccagaaactgaccgtatt
ggtaaagttttatggcaattaaaccaagctcgcaaagacattgagttagatatttttcag
gaagtaaaagcaaagatcgaatcgaatgcaattgatttgagcaaagaaaatatcatcatt
gctgcaagtgctaactggcagactggggttattggattagttgcatcacgattagttagc
gcgtacggtaagccaaccttgctgtttcacttaaccaaagatggtgttgcaaaaggttca
tgccggtcgattcctgaattttctatttttgatgggctggttgaaagtgggcatctgtta
gagtcgtttggtgggcatgctcaagcagcagggcttgcaattaaagttgagcatttacca
caattaaaagaaaatttagaaaaaaagatagccgcagaattaacagaattagacttagta
caaaaattacgcatcgatgcttacgcaaaactgccagatttttctaataaatttattgca
gacatggcacatcttgaaccatttggtcaccaaaattcacagccatatttttatattaaa
gatgttgtgctcgtacaacgcccaacactcatgaaagatttacatattaaatgtgtggtc
tttgctgatggcgtcattaaatcgctcatattttttaaccgaccagagctgtttgaagcg
ttggttatgcaaggtgatgagacgtttgatatcgttgcgcaagtcatgcaaaattattgg
aatggcaaatgcacggtagagttacagggtgttgatattgcgcggttacgacaaattgag
gaaaatttataa
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