Colletotrichum destructivum: 87936532
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Entry
87936532 CDS
T10409
Symbol
CDEST_00029
Name
(RefSeq) Putative histone-binding protein RBBP4
KO
K14848
ribosome assembly protein RRB1
Organism
cdet Colletotrichum destructivum
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cdet03009
]
87936532 (CDEST_00029)
Ribosome biogenesis [BR:
cdet03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
87936532 (CDEST_00029)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
CAF1C_H4-bd
WDR55
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
MIOS_WD40
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
87936532
NCBI-ProteinID:
XP_062772239
UniProt:
A0AAX4HVY4
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All DBs
Position
1:complement(join(87955..89222,89278..89482))
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AA seq
490 aa
AA seq
DB search
MSKRSADIEMGDAPLKGGDRPEGMEIDEKDPGMGEFEDEFEDEFEEDEIMEAGVDGRPDA
EREAEEKEAAVDQGTFIVGRNKLEAGQTLAPDVSTYEMLHNISTPWPCLSFDILRDSLGD
NRKVYPATMYTVAGTQAENARANDNQLMVMKFSGLSRTEKNEEESDDEEDDDEDAEPILE
HKSIPMNSATNRIRAHQIPSQDASRPPTTLTASMTESSNVFIHDITPHLYSFDNPGTVIS
TQQNKPVSTIRAHKSEGYALAWSPLVPSGKLLTGDNDGLIYLTTRTDGGGFVTDNRPFQG
HTSSVEEILWSPSEQSVFSSASSDGTIRVWDVRSKSRKPALSMQVSSTDVNVMSWSPLTT
HLLASGADDGEFAVWDLRQWKQSSTSPSDKPSPIASFNYHKEQVTSIEWHPTDDSIIAVA
AGDSTVTLWDLAVELDDEESKDTGGVKDVPPQLLFVHYLSNVKELHWHPQITGSLVATGD
EFSIFRTISV
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgatctgccgatatcgagatgggcgacgcccccctcaagggaggcgatcgc
cccgagggtatggagattgacgagaaggaccccggaatgggcgagtttgaggacgagttc
gaggacgagtttgaggaggacgagatcatggaagccggcgttgacggacggcccgatgcg
gagagagaagccgaggagaaggaagccgcggttgaccagggcaccttcatcgtcggacga
aacaagctcgaagccggacagacactcgcgcccgacgtgtcgacatatgagatgctgcac
aacatcagcaccccatggccctgtttgtcgtttgatatcctccgcgacagcctcggggat
aaccgcaaagtctaccccgccaccatgtacaccgtggccggcacacaggccgagaacgcc
agggccaacgacaaccagctgatggttatgaagttcagcggcctgagtcgaacggagaag
aacgaggaggaatctgacgacgaggaagacgacgacgaggacgccgaacccattttggag
cataagtccatccccatgaactcggccacaaaccgaatccgcgcccaccagatcccgtcg
caagacgcctccagacccccgactaccctaaccgcgagcatgaccgagtcttccaacgtc
ttcatccacgacattacccctcatctctactccttcgacaacccgggcaccgtcatatct
acccaacaaaacaagccggtatcgaccatccgcgcccacaaatcggagggttatgccctg
gcctggtctccccttgtccctagcggaaagcttcttaccggtgacaacgatggcctgatc
tacctcacaacgcgcaccgatggcggcggcttcgtcaccgacaaccggccattccagggc
cacaccagcagtgtcgaggagatcctctggagcccgtccgagcagtccgtcttctcgtct
gcatcaagcgacggcacgatccgcgtctgggatgtccgcagcaagagcagaaagcctgcg
ttgtccatgcaggtcagctcgaccgacgtcaacgtcatgtcgtggtcgcctctcacgacg
cacctgctcgcctcgggcgccgacgacggcgaatttgccgtctgggacctgcgtcagtgg
aagcagagctcgacctcgccttcagacaagccctcgccgattgccagctttaactaccac
aaggagcaggtcacgagcatcgagtggcaccccacagacgacagcatcattgccgtcgcg
gcgggcgacagcaccgtaaccctctgggacttggccgtcgagctcgacgacgaggagagc
aaggacactggaggcgtcaaggatgtgccgcctcagctgctgtttgtgcactacctgtcc
aacgtcaaagagctgcactggcacccccagatcactggcagcctggtagccacaggtgat
gaatttagcatcttccgcacgattagcgtttag
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