Colletotrichum destructivum: 87936535
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Entry
87936535 CDS
T10409
Symbol
CDEST_00032
Name
(RefSeq) Putative U-box domain, Zinc finger, RING/FYVE/PHD-type, pre-mRNA-splicing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
cdet Colletotrichum destructivum
Pathway
cdet03040
Spliceosome
cdet04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
87936535 (CDEST_00032)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
87936535 (CDEST_00032)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdet03041
]
87936535 (CDEST_00032)
04121 Ubiquitin system [BR:
cdet04121
]
87936535 (CDEST_00032)
03400 DNA repair and recombination proteins [BR:
cdet03400
]
87936535 (CDEST_00032)
Enzymes [BR:
cdet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
87936535 (CDEST_00032)
Spliceosome [BR:
cdet03041
]
Complex B
Other components
Prp19 complex
87936535 (CDEST_00032)
Complex C
Prp19-CDC5 complex
87936535 (CDEST_00032)
Ubiquitin system [BR:
cdet04121
]
Ubiquitin ligases (E3)
U-box type E3
87936535 (CDEST_00032)
DNA repair and recombination proteins [BR:
cdet03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
87936535 (CDEST_00032)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Prp19
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WDR55
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
B-prop_COPA_B_2nd
Beta-prop_Aladin
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_Vps41
EIF3I
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
Beta-prop_HPS5
V_ATPase_I_N
Beta-prop_CAF1B_HIR1
U-box
zf-Nse
Beta-prop_ACSF4
NBCH_WD40
Beta-prop_WDR35_TULP_N
VID27
Lactonase
Motif
Other DBs
NCBI-GeneID:
87936535
NCBI-ProteinID:
XP_062772242
UniProt:
A0AAX4HV71
LinkDB
All DBs
Position
1:complement(join(94788..95266,95320..95777,95832..96270,96321..96365,96418..96430))
Genome browser
AA seq
477 aa
AA seq
DB search
MLCAISGEAPQEPVASKKSGTIFEKRLIEKYIEENGTEPVTGEALTNDDLLPLTQSHIVR
PRPPTLTSIPALLATFQNEWDALALETFNLKEQLARTREELATALYQHDAAVRVIARLSK
ERDEAREALSKVSVTAGATNGDAMTIDSAEGLPEEWIHKVNAKHQELSKGRKKRPVPEGW
ATSEDVASLVTVASTPAPVSNASSLALQGSYAAVGGRGGDAAIYSVEADSVERQVAVNEP
VIDSVWTDNKLIFATSKGSVKVFEGGSEVASLSEHAGPVTSLSVHPTGDLLASVGSDKSI
VFYDLHALKRISRTYADTALTSSAFHPDGHLFAAGTVTGDISLFMTTSLEVAAVFSLGAP
VEALTFSENGFWLAATAKGQSSVTIFDLRKEGDAARVKTLETGGPVQSLAWDYTGQYLAT
AGAGGITVQQYIKSSKSWSEPLRTSVAALSVKWGADAKQLISVNEEGVVSVFGVKQE
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcgcaatctctggagaagctccccaggagcccgtcgcctcgaagaagtcgggc
accattttcgagaagcgcttaatcgagaagtacatcgaggaaaacggaaccgagcccgtg
actggagaagctcttacgaacgatgacctgcttcccctgacccaatcgcatattgttcga
cctagacccccgacgctcacctcgattccggccctgcttgcgactttccaaaacgagtgg
gatgctctagctctcgagacattcaacctcaaggagcagcttgcgaggacacgggaggag
ctcgcgacagccctgtaccagcatgatgccgccgtcagagtcattgcgcgcttgtcgaag
gagcgagacgaagccagagaggcgctttccaaggtcagcgtcaccgctggagctacaaat
ggagacgcgatgaccatcgactcggccgaggggcttcctgaggagtggattcacaaggtc
aacgcgaagcaccaagaactctccaagggccgcaagaagcgcccagttcccgaaggctgg
gccacctccgaagacgttgcctcgctggtcactgttgcttcgacaccagcaccggtctcc
aacgcctcctcgctcgcgcttcagggaagttatgcggcagttggcggccggggcggcgac
gctgcgatatactcggtcgaggcggactcagtcgagcgtcaagtcgctgtcaatgagccg
gttatcgactctgtgtggacggacaacaagctgatctttgccacgagcaagggatcagtc
aaggtctttgagggcggcagcgaagttgcatcactttccgagcacgcgggacctgtgacg
tccctgagcgtccaccctactggtgaccttctcgcgtccgtcggttcagataagagcatc
gtattctacgacctccacgccctgaagaggatcagccgcacgtatgccgatacagctctg
acatcctcggcattccaccccgacggccatctcttcgcggcgggcactgtcacgggtgac
atcagtctgttcatgacgacgagcttggaggttgcagctgttttcagccttggcgcaccc
gtcgaggctctgacgttctcagaaaatggattctggcttgcggcaacggccaagggtcag
agctcagttacgatcttcgatctgcgcaaggagggagatgctgccagagtcaagacactc
gagaccggcgggccagtccagtccttggcctgggattataccggacagtatctcgccact
gcgggtgctggcggcatcacagtgcagcagtacatcaagagctcaaagtcgtggtcggaa
cctctgagaacgtcggttgcggcgttgtcggtcaagtggggtgctgatgccaagcagctg
atttctgtcaacgaggagggtgttgtttctgtgtttggagtcaaacaggagtaa
DBGET
integrated database retrieval system
