Colletotrichum destructivum: 87936717
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Entry
87936717 CDS
T10409
Symbol
CDEST_00214
Name
(RefSeq) Putative ATP-dependent RNA helicase DEAD-box, Helicase superfamily 1/2, ATP-binding protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cdet Colletotrichum destructivum
Pathway
cdet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
87936717 (CDEST_00214)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdet03041
]
87936717 (CDEST_00214)
03009 Ribosome biogenesis [BR:
cdet03009
]
87936717 (CDEST_00214)
Enzymes [BR:
cdet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
87936717 (CDEST_00214)
Spliceosome [BR:
cdet03041
]
Complex A
U1 snRNP components
U1 related factors
87936717 (CDEST_00214)
Complex B
87936717 (CDEST_00214)
Ribosome biogenesis [BR:
cdet03009
]
Eukaryotic type
Pre-60S particles
Helicases
87936717 (CDEST_00214)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Utp25_C
P-loop_SecA
Glyoxalase_3
Motif
Other DBs
NCBI-GeneID:
87936717
NCBI-ProteinID:
XP_062772424
UniProt:
A0AAX4HW66
LinkDB
All DBs
Position
1:join(736072..736214,736407..736522,736577..737545,737599..737706,738149..738277,738329..738490,738548..738591)
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AA seq
556 aa
AA seq
DB search
MSYGGGYGGGGRGGGGGYGGGGGGYGGGRDRSDRGGRDGGYGGGGFNGDSNGYGGGGGGY
GGGGYGGGGGGDRMNNLGAGLRTQEWDINTMPKFEKSFYKEHDEVANRSPEDVEAFRRKH
QIAIAGSDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAET
GSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQQEISKFGKSSRIRNTC
VYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEP
QIRKIIGQIRPDRQTLMWSATWPKEVRALASDFLTDFIQVNIGSMELAANHRITQVVEVV
NESEKRDRMIKHLEKMMDNKENKVLIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNER
DWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGALGT
AVTFFTTDNSKQARDLVNVLREAKQEIDPRLAEMTRYGGGGGGGRYGGWGRGRGGGRGGG
GGHNSNNAPLGGARRW
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacggcggcggatacggcggcggcggtcgcggcggcggtggcggctacggagga
ggtggtggtggctacggcggtggtcgcgatcgcagtgacagaggtggtcgcgatggcggc
tacggcggtggtggtttcaacggtgacagcaacggctacggtggtggcggtggtggttac
ggtggtggtggttacggcggcggcggcggcggcgaccgcatgaacaaccttggcgccggt
cttcgcacgcaagaatgggacatcaacacgatgcccaagttcgagaagtctttctataag
gagcacgatgaggtcgccaaccgcagccccgaggatgtcgaggccttccgccgcaagcac
cagattgccattgctggcagcgatgttcccaagcctgtcgagaccttcgacgaggctgga
ttccccagatatgtcatggacgaggtcaaggcccagggcttccccgctcccaccgccatt
caatcccagggttggcctatggctctttccggtcgcgacgtcgtcggtattgccgagact
ggttccggaaagacgcttacctactgccttcccgccatcgttcacatcaacgcccagccc
ctcttggcccccggcgatggtcccatcgtcctgatccttgctcccacccgtgagcttgcg
gtccagattcagcaggagatttccaagttcggcaagtcttcccgcattcgcaacacttgt
gtctacggtggtgtccccaagggcccccagatccgcgacctctcccgcggtgtcgaggtc
tgcattgcaactcccggacgtctcatcgacatgctcgaggctggcaagaccaacttgcgt
agagtcacctacctggttctcgacgaggctgatcgcatgttggatatgggtttcgagccc
caaattcgcaagattatcggccagattcgccccgaccgtcagaccctcatgtggtccgcc
acttggcccaaggaggtccgcgcccttgcctccgacttcctcaccgacttcatccaggtc
aacatcggctccatggagctggctgccaaccaccgcatcacccaggttgtcgaggtggtc
aacgagagtgagaagcgtgatcgcatgatcaaacacctcgagaagatgatggacaacaag
gagaacaaggttctcatcttcgtcggcaccaagcgtgttgccgacgagatcactcgcttc
cttcgccaggatggatggcccgcgctttccatccacggtgacaagcagcagaacgagcgt
gactgggttctggaccagttcaagacgggcaagagccctatcatggtcgctaccgacgtc
gcgtcgcgtggtattgatgttcgcaacattactcacgtgctgaactacgactaccccaac
aactcggaggactacatccaccgtatcggccgtaccggtcgtgctggtgccttgggtacc
gccgttaccttcttcaccactgacaactccaagcaggctcgcgacctcgtcaacgtcctc
agggaagccaagcaggagatcgatcctcgtcttgctgagatgacccgctatggcggcggt
ggtggtggtggtcgctacggcggctggggccgtggccgcggtggtggccgtggcggtggc
ggtggtcacaattctaacaacgcccccctaggtggtgcccgacgctggtaa
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