Colletotrichum destructivum: 87937093
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Entry
87937093 CDS
T10409
Symbol
CDEST_00590
Name
(RefSeq) Putative ribosomal protein eL30-like superfamily
KO
K03265
peptide chain release factor subunit 1
Organism
cdet Colletotrichum destructivum
Pathway
cdet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
87937093 (CDEST_00590)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdet03019
]
87937093 (CDEST_00590)
03012 Translation factors [BR:
cdet03012
]
87937093 (CDEST_00590)
Messenger RNA biogenesis [BR:
cdet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
87937093 (CDEST_00590)
Translation factors [BR:
cdet03012
]
Eukaryotic type
Release factors
87937093 (CDEST_00590)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
87937093
NCBI-ProteinID:
XP_062772800
UniProt:
A0AAX4HWP5
LinkDB
All DBs
Position
1:join(1909903..1909938,1910050..1910134,1910194..1910243,1910303..1911434,1911492..1911496)
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AA seq
435 aa
AA seq
DB search
MSDPQANEAEKNIEIWKVKKLIKRLEAARGNGTSMISLIIPPKDQISRAAKMLAEEYGTA
SNIKSRVNRQSVLSAITSTQQRLKLYNKVPPNGLVVYCGEILTSEGKERKVNIDFEPFKP
INTSLYLCDNKFHTEALAELLESDQKFGFIIMDGNGALFGTLSGNTREVVHKFSVDLPKK
HGRGGQSALRFARLREEKRHNYVRKVAELAVQNFITNDKPNVAGLILAGSADFKTDLNAS
DLFDNRLATKVIKVVDVSYGGENGFNQAIELSSETLGNVKFIQEKKLIGKYFEEISQDTG
RVCYGIDDTLKALELGAVETLIVFENLEITRWKLKDSQGVEHLLHTTKQQEGGDRAIFMD
KETGQEMEVVTQESFLEWIAEHYKDFGTNLEFVSDRSTEGNQFVKGFGGIGGILRYKVNF
EQLADIDDDDEYYDD
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatccccaggcaaacgaggccgagaagaacatcgagatatggaaggtcaaaaag
ctgatcaagcgcctcgaggccgctcgtggtaacggcacgtccatgatctcgctcattatt
ccgcccaaggatcagatttcccgagccgccaagatgttggctgaagaatacggaacggcg
tcaaacatcaagtctagagtcaacagacaatctgtgctttcggccattacctccacccag
caacgtctcaagctgtacaacaaggttcctcccaacggcttggtcgtctactgcggtgaa
atcttgacctcggaaggcaaggagaggaaagtcaacatcgatttcgaacccttcaagccc
atcaacacgtctctctacctctgtgacaacaagttccataccgaggctctggctgagctg
ctcgagtccgaccagaagtttggtttcattattatggacggtaacggagcgctattcggc
actctttccggaaacactagagaagtcgtccacaagttctctgttgatcttcccaagaag
cacggccgtggtggtcagtccgcccttcgtttcgcccgtcttcgtgaggagaaacgccac
aactacgtccgcaaggttgcagagttggccgtccagaacttcatcaccaatgacaaaccc
aacgtcgccggtctgattttggctggttctgccgatttcaagactgacctcaacgcctcc
gatctattcgacaaccgtctggccaccaaggtcatcaaagtcgttgacgtttcctacggt
ggcgagaacggtttcaaccaggccatcgaactgtcctccgagactctcggcaacgtcaag
ttcatccaggagaagaagcttatcggaaagtactttgaggagatcagccaggacactgga
cgcgtctgctacggtatcgacgacactctgaaggctctggaactcggtgctgttgagact
ctcatcgttttcgagaacttggagattacccgctggaagctcaaggacagccagggcgtc
gagcaccttttgcacaccaccaagcagcaggaagggggtgaccgcgccatctttatggac
aaggagaccggccaagagatggaagtcgttacccaagaatctttcctcgagtggattgcg
gagcactacaaggactttggtaccaacctcgagttcgtctcggaccgttctaccgaagga
aaccagttcgtcaagggattcggcggtatcggtggtatcctccgatacaaggtgaacttt
gagcagttggctgatattgacgacgatgatgagtactacgacgattga
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