Colletotrichum destructivum: 87937426
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Entry
87937426 CDS
T10409
Symbol
CDEST_00923
Name
(RefSeq) Putative DNA ligase, ATP-dependent, nucleic acid-binding protein
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
cdet Colletotrichum destructivum
Pathway
cdet03030
DNA replication
cdet03410
Base excision repair
cdet03420
Nucleotide excision repair
cdet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
87937426 (CDEST_00923)
03410 Base excision repair
87937426 (CDEST_00923)
03420 Nucleotide excision repair
87937426 (CDEST_00923)
03430 Mismatch repair
87937426 (CDEST_00923)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdet03032
]
87937426 (CDEST_00923)
03400 DNA repair and recombination proteins [BR:
cdet03400
]
87937426 (CDEST_00923)
Enzymes [BR:
cdet01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
87937426 (CDEST_00923)
6.5.1.6 DNA ligase (ATP or NAD+)
87937426 (CDEST_00923)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
87937426 (CDEST_00923)
DNA replication proteins [BR:
cdet03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
87937426 (CDEST_00923)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
87937426 (CDEST_00923)
DNA repair and recombination proteins [BR:
cdet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
87937426 (CDEST_00923)
NER (nucleotide excision repair)
Other NER factors
87937426 (CDEST_00923)
MMR (mismatch excision repair)
Other MMR factors
87937426 (CDEST_00923)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
87937426
NCBI-ProteinID:
XP_062773133
UniProt:
A0AAX4HYV9
LinkDB
All DBs
Position
1:join(3059573..3059742,3059849..3059979,3060035..3061202,3061258..3062026,3062095..3062631)
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AA seq
924 aa
AA seq
DB search
MACARLLSSPIPRRNVLRAAAFCNDTRLFTVYIQPRIKMPPKQATLGYVKTSQTTLGKFF
GAKDSRPEPQQSKLSFATKAAPKKAVERKAEAPDAAVKEEKSRKRTRSPSPANKASSPKV
KDEITEEDEEDEPATKRPRRVRQRIVEEEEEDEMMNEVPAKSPTVSPKASRTKRSSPMKP
TKAVKARADAPDSSRSKRASKSPSPTIVLKQEKEEATESASEDDLVEDDEEDIKPAVAKK
TLEKVQMRLKTQTKDPYPDWKQGEPVPYAALCTTFSLIELTTKRLEIMAHCSLFLRQVLR
LTPDDLLPTVLLMINKLAPDYAGIELGIGESLIMKAIGETTGRSLAVIKQDQKEIGDLGL
VAVKSRSTQPTMFKPKPLTISGVHKGLMGIATVSGNGAQGRKVDAIKKLLSAADSHSSGK
VDISKDKGGPSEAKYLVRFLEGKLRLGLAEKSVLVSLAQAVAFHEADAKGQVPKPTDVEQ
AEAILKTVYSELPSYDVIIPAMVEHGIMNLREHCKLKPGVPLKPMLAKPTKAITEVLDRF
EDQTFTCEYKYDGERAQIHYVAKSADEEISQSLPGATKAAADGVASIFSRNSEDLSKKYP
DILTKLHTWVKEDTKSFVLDCETVAWDVEEKKVLPFQQLMTRKKKDVKIEDVKVKVCVFA
FDLLYLNGEAIVERSLRERRDLLENAFQPVEGEFSLATHMDGQELEQIQVFLDESVKASC
EGLMVKMLDGSESGYEPSKRSRNWLKIKKDYLSGIGDSLDLVVLGAYHGKGKRTSVYGAF
LLACYNPSSESYETVCNIGTGFSEAVLEELHTQLSDIVIDRPKPFYAHSSGGQHQPDVWF
EPRYVWEVKTADLTLSPRYKAGCKEGVDPGGEKGISLRFPRFIKVRDDKKPDEATSSRQV
AEMYRKQESVTKSKGPAADDDFEY
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcgcccgccttttaagcagcccaattcctcgcaggaacgtactcagggcggcg
gccttttgcaacgatactcgactcttcactgtttatattcaaccacgcatcaaaatgccg
ccgaagcaggcgacactggggtacgtcaagacctcgcagacaacactgggcaagttcttt
ggagcaaaagactccaggcccgagccgcagcaaagcaagctcagcttcgctaccaaggca
gcgcccaagaaggcggtcgaaaggaaggcggaggccccagacgcagcagtcaaggaagaa
aagtccaggaaacgaaccagaagcccaagtcccgccaacaaggcatcgagtccgaaagtc
aaggatgagatcactgaggaggatgaagaggacgaacctgccacgaagaggccccgcaga
gttcgtcaacgtatcgtcgaggaagaggaagaggacgaaatgatgaatgaagttccagcc
aagtcgcccacagtgtcacccaaggcctcgaggaccaaaaggagtagccctatgaaacca
acgaaggctgtcaaggccagggctgacgcacccgattcttctcgttcgaagagagcttcc
aagtctccctcgcctacgatagtcttgaaacaggagaaggaggaggcaacagagtctgcg
tccgaagacgacttagttgaagacgacgaagaggatatcaagcccgcggtagcgaagaag
acactagagaaggtacagatgaggctcaaaacgcagaccaaagacccgtacccagactgg
aaacaaggcgaaccggttccttacgccgcgctctgcaccaccttctctctaatcgagctc
acgaccaagcggcttgaaatcatggcccattgctcgctattccttcgacaggtcctgcgc
ttgacccccgacgatctgcttcctaccgtcctccttatgatcaacaagctagctcctgat
tatgccggtatcgagctaggaatcggcgagtctctcatcatgaaagccattggcgagaca
acaggtcgcagtcttgccgtcatcaagcaagatcagaaagagattggagatcttggtctc
gtcgctgtcaagagtcggtcaacacagcccactatgttcaagcccaaacccttgacgatt
agtggcgtgcataaaggtctgatgggtatcgctactgtttccggcaacggtgctcaaggt
cgcaaagtggacgctatcaagaagctactgtcggcagctgattctcattcctctggaaag
gtggacatcagcaaggacaagggtggccccagcgaagccaaatatcttgttcgattcctc
gagggcaagctccgcttaggcttggccgaaaagtctgtccttgtctctttggctcaagct
gtggcatttcacgaggcagatgccaagggtcaggtacccaagcctacagacgtggagcag
gcggaggccattctcaagacggtgtacagtgaacttccgagctacgatgtcatcataccc
gccatggtggagcacggcatcatgaaccttcgggaacattgcaagctcaagcctggagtg
cctctcaagcccatgttggccaagccaacgaaggctatcaccgaggtgctggaccgcttc
gaggaccagaccttcacatgtgagtacaaatacgacggcgaacgagcccaaatccactat
gtggccaagtctgccgacgaggagatcagtcagtctctgccgggggctacgaaggctgcg
gcagatggagtagcttccatcttctctcgaaattccgaggacttgtcaaagaagtaccct
gatattctcaccaaactacacacttgggttaaagaagacacaaagagcttcgtgctggat
tgtgagacggttgcctgggatgtcgaagaaaagaaggtcttaccattccagcaattgatg
acgcgcaagaagaaggacgtcaagattgaggatgtcaaggtcaaggtgtgcgttttcgcc
tttgatttactatatctcaatggagaggccatcgttgagaggtcactccgcgaacgccgc
gatcttctcgagaatgccttccagcccgtagagggcgaattctccttggccacgcacatg
gacgggcaagagctggagcagatccaagtgttcctcgacgaaagcgtcaaggcatcctgc
gagggtctgatggtcaagatgttggacggctcagagagcgggtacgagcccagcaagaga
agtcgaaactggctcaagatcaagaaggattacctcagcggcatcggcgactcgctcgat
ctcgtcgtgctgggcgcatatcacggcaaaggcaagcgtacatccgtctacggcgcgttc
ctgcttgcatgttataacccttcgtccgagtcgtatgaaactgtctgcaatatcggtaca
ggattctccgaggccgtcctcgaggagctgcacacgcagctctcggacatagtcattgac
cggcccaaaccgttttacgcacactcctcgggcgggcaacatcagcccgacgtgtggttc
gagccgcgttacgtctgggaggtcaagacggccgacctgacgctcagcccgcgatacaag
gccggttgcaaggagggcgtcgacccaggcggtgagaagggcatcagtctccgattcccg
cggttcatcaaggtgcgcgacgacaagaagcccgacgaagctacgtccagccgccaggtg
gccgagatgtaccgcaagcaggagagtgtgaccaagagcaagggtcccgcggcggatgat
gatttcgagtattaa
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