Colletotrichum destructivum: 87939133
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Entry
87939133 CDS
T10409
Symbol
CDEST_02630
Name
(RefSeq) Putative RNA recognition motif domain, nucleotide-binding alpha-beta plait domain superfamily
KO
K14407
cleavage stimulation factor subunit 2
Organism
cdet Colletotrichum destructivum
Pathway
cdet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
87939133 (CDEST_02630)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdet03019
]
87939133 (CDEST_02630)
Messenger RNA biogenesis [BR:
cdet03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
87939133 (CDEST_02630)
U7-dependent histone pre-mRNA processing factors
87939133 (CDEST_02630)
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
Spo7_2_N
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
87939133
NCBI-ProteinID:
XP_062774840
UniProt:
A0AAX4I2M0
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Position
2:complement(join(1408838..1409497,1409561..1409676,1409730..1409855,1409908..1409956))
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AA seq
316 aa
AA seq
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MSKPPSRVVFVGNIPYGLSEEQISDIFSSAGKVLNFRLVYDRETGRPKGFGFAEYPDNDS
AASAVRNLNDYEIMGRKLRVDFSNEGGSDGNDDNHGHQQGRDGGNTSSYASNGYNPTAPP
TQPSTLPPLPAGKELPPNVTATDAISRTLNTLPPSQLLDILTQMKALASSDPARATELLQ
QAPQLAYAVFQALLLMGLVSPEAIHSVIEAGGAPSATPVQAPPIGYPLQPPAPGFPPVPV
PGANNTPPVSGTPYAPPPQQVSYGAPPPPAAGALGQDPDALMRQVMELPMETINMLPEAE
RQQILALRASFGGQRR
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagccgccctccagagtcgttttcgtgggcaatatcccgtatggcctttccgag
gagcagatcagcgacatcttcagcagcgcaggcaaggtcctgaacttccgcctcgtctat
gaccgcgagaccgggcggccaaaaggctttggcttcgcagagtaccccgacaatgattca
gcggcatccgcggttcgcaacctcaacgactatgagatcatgggtaggaaactgagagtc
gacttttccaacgaaggaggtagcgatggtaacgacgacaatcacggacatcagcagggc
cgagacggcggcaatacctcctcctacgcctcgaacggttataacccgaccgcgccccca
acgcaaccgagcacgcttcctcccctaccagccggcaaggaactccctcccaatgtgacg
gcaaccgatgcaatttcccgcacgcttaacacgctgcccccctcccagctcctggacatt
ctcacacagatgaaggcgctggcctcctccgaccccgccagggctacggagctcctccag
caggcgccgcaactggcctacgcggtcttccaggccctcctattgatgggtctcgtgtct
ccggaggcgatccactccgtcatcgaagccggcggcgcgccctccgcgaccccggtccag
gctccgccgatcggttatccgctccagcccccagccccgggctttcctcccgtgcccgtg
ccgggtgctaacaacaccccgcccgtctccggcaccccctatgcgccacccccacagcag
gtctcgtacggtgcgccgcccccgccggccgccggggctttgggccaggatccggacgcg
ctcatgcggcaggttatggagctgccaatggagacgatcaatatgctccccgaggccgag
aggcagcagattctagcacttcgtgcaagctttggtggacagagacgatga
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