KEGG   Colletotrichum destructivum: 87939322
Entry
87939322          CDS       T10409                                 
Symbol
CDEST_02819
Name
(RefSeq) Putative pre-mRNA processing factor 4 (PRP4), WD40/YVTN repeat-like-containing domain superfamily
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cdet  Colletotrichum destructivum
Pathway
cdet03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cdet00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    87939322 (CDEST_02819)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cdet03041]
    87939322 (CDEST_02819)
Spliceosome [BR:cdet03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    87939322 (CDEST_02819)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_THOC3 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 EIF3I WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 PRP4 Beta-prop_HPS5 NBCH_WD40 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_EIPR1 Tricorn_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_RIG_1st WDR54 Beta-prop_DCAF4 Nbas_N Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 87939322
NCBI-ProteinID: XP_062775029
UniProt: A0AAX4I482
LinkDB
Position
2:1993813..1995360
AA seq 515 aa
MMHPSRQAYVEEAMDEDRGIALEDIPTDHDYEIPSAFSGAAPEKASAVLAQMERKKLAAS
IAVPTDDNRVRAKLREMGEPITFFGEGKPERRDRLRNLLAIQHEMAGLESGDIEMEDVDE
DGEEQDEEFYTPGGQALLQARIDITKYSLPRAKRRIQFQKAEASIPLRTHVKFRKQIKDK
LEAFELQGSQTAGDRHISMTRLSPNGEIVAVGNWGGGLKLIEVPSLEAKLNLRGHTQKIS
GISWRPGSTLTESNVSPDAVNLASGGAEGSVHLWSLNQDTPLSTLTGHGGRVSRVEFHPS
GRYIASASDDTTWRLWDVETTAELLLQEGHSRGVYSVSFNADGSLLASAGLDSIGRIWDL
RSGRTVMILDEHIQPIYALDWGSEGHRVLSGSADGWIKCWDIRKVQRTANLGAHAKAVSD
IRWFRGLDDPIDGNPPGTDEKGAQQPKKAGTFFVSSGFDAKIKIFSADNWGVIQTLSGHS
GPVASVDVSRDGKWIVSGGHDRTVKLWGRNDGEGL
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgatgcatccgtcgcgacaagcctatgtcgaggaggcgatggacgaggatcgaggcatt
gcgctggaggatattcccacggatcatgactacgagatcccctccgcattctctggcgcc
gcgcccgaaaaagcctccgccgtcctggcgcagatggagagaaagaagttggcagcaagc
attgccgtgcctacagacgacaaccgagtgcgcgcgaagctcagagagatgggcgagccc
atcacattcttcggcgaaggcaagccagaacgcagagaccgtcttcgcaaccttcttgcc
attcagcacgagatggccggtctcgaaagcggcgacatagaaatggaagacgtagacgag
gacggagaagagcaggacgaggaattttacacaccgggcggccaggcactgctgcaggcg
cgcatcgacatcacgaaatattcactcccgagagcaaaacggcggatccagttccagaag
gccgaagcctcgattcctttgcgcacacacgtcaagttccggaaacagatcaaggacaag
ctggaagcctttgagcttcaaggtagtcaaacagccggcgataggcacatcagcatgacg
agactgtcgccgaacggggagatcgttgcggtgggcaactggggtggaggcctcaagctt
attgaggttcccagtttggaggcaaagttgaacctcaggggacacacccagaaaatcagc
ggtatttcatggcgtcctggttctacgcttaccgaaagcaacgtgtctccggacgcagtg
aaccttgcatctggaggagctgaaggctcggtgcacctgtggtctttgaatcaggatact
cccctttcaacactcactggccatggcggcagagtgtcccgcgttgagtttcatccttcc
ggccgttatattgcgtcggcttcggatgataccacatggaggctctgggatgtcgagacg
actgctgagctgctgcttcaggaaggtcactccagaggcgtttactctgtcagtttcaac
gctgatgggtccttgttggcaagcgctggtctcgacagcattggccgtatttgggatctg
cgatcaggacgaactgtgatgatccttgatgagcatatccaacctatttacgcgctcgac
tggggttccgagggtcacagggtactgtcaggatcggcagacggctggatcaagtgttgg
gatattcgcaaggtccagagaacagcaaacttgggagcgcacgcgaaagctgtttccgac
atacggtggttcaggggattggacgaccccatcgatgggaaccccccggggacagatgag
aagggcgcgcaacaacccaagaaggccggtacattctttgtgtccagcggctttgacgcc
aagatcaagatcttctcggccgacaattggggcgtcattcagacgctgagcggacattct
gggcctgttgccagtgtcgatgtgagtagagacggcaaatggatcgtgagtggaggacac
gatcggacggttaagctttggggccgcaacgacggtgagggtctttga

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