Colletotrichum destructivum: 87939337
Help
Entry
87939337 CDS
T10409
Symbol
CDEST_02834
Name
(RefSeq) Putative proliferating cell nuclear antigen, PCNA, DNA clamp superfamily
KO
K04802
proliferating cell nuclear antigen
Organism
cdet Colletotrichum destructivum
Pathway
cdet03030
DNA replication
cdet03410
Base excision repair
cdet03420
Nucleotide excision repair
cdet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
87939337 (CDEST_02834)
03410 Base excision repair
87939337 (CDEST_02834)
03420 Nucleotide excision repair
87939337 (CDEST_02834)
03430 Mismatch repair
87939337 (CDEST_02834)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdet03032
]
87939337 (CDEST_02834)
03400 DNA repair and recombination proteins [BR:
cdet03400
]
87939337 (CDEST_02834)
DNA replication proteins [BR:
cdet03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
87939337 (CDEST_02834)
DNA repair and recombination proteins [BR:
cdet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
87939337 (CDEST_02834)
MMR (mismatch excision repair)
Other MMR factors
87939337 (CDEST_02834)
TLS (translesion DNA synthesis) factors
Other TLS factors
87939337 (CDEST_02834)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Rad1
Rad9
Hus1
DNA_pol3_beta_3
Motif
Other DBs
NCBI-GeneID:
87939337
NCBI-ProteinID:
XP_062775044
UniProt:
A0AAX4I496
LinkDB
All DBs
Position
2:join(2031229..2031270,2031339..2031768,2031835..2032124,2032182..2032199)
Genome browser
AA seq
259 aa
AA seq
DB search
MLEARLDQADILKKVVDAIKDLVQDCNFDCNDSGIMLQAMDNSHVALVSMALKTEAFSPY
RCDRNIALGVNLGSLTKVLRAAQGDDVLTLKAEDAPDSLNILFESSENDRISEYDLKLMD
IDQEHLGIPETDYAATITMPSSEFKRICMDLMAMSESVTIDASKDGVKFACNGDIGNGSV
TLRSHTNVDKPELNVDIALSEPVSLTFSLKYLVNFCKAAAISKQVKICLSNEVPLLVEYT
LVGQSYLRFYLAPKIGDEE
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgttggaagctagactcgaccaggccgatatcctgaagaaggttgtcgatgctatcaag
gacctcgttcaggactgcaatttcgactgcaatgactccggcattatgctccaggccatg
gacaactcgcatgttgccctggtgtctatggctctcaagaccgaggccttctccccctat
cgctgtgatcgcaacatagcgcttggtgtcaacctggggtcgctgaccaaggttctccgc
gctgctcagggggacgatgttctgacgctcaaggccgaggacgcacccgacagcctgaac
attctctttgagagctccgagaacgaccgcatcagcgagtacgacctcaagttgatggac
atcgatcaggagcatctgggtatccccgagacggactacgctgcaacgatcaccatgccc
agcagcgagttcaagcgtatctgcatggatctgatggccatgagcgagtcagtgacgatc
gacgcaagcaaggacggtgtcaagttcgcatgcaacggcgacatcggcaacggatccgtc
acccttcgaagccacaccaacgtcgacaagcccgagctcaacgtcgacattgccttgtcg
gagcccgtctcgctgaccttctccctcaagtacctggtcaacttctgcaaggctgccgcc
atttccaagcaggtcaagatctgcctgtcaaacgaggtaccgctgctggtcgagtacact
ctggtgggccagagctacctgcgcttctacctggcgcccaagattggcgacgaggagtaa
DBGET
integrated database retrieval system
