Colletotrichum destructivum: 87939347
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Entry
87939347 CDS
T10409
Symbol
CDEST_02844
Name
(RefSeq) Putative helicase, HRDC domain, DNA/RNA helicase, ATP-dependent, DEAH-box type, RQC
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
cdet Colletotrichum destructivum
Pathway
cdet03440
Homologous recombination
cdet03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
87939347 (CDEST_02844)
03460 Fanconi anemia pathway
87939347 (CDEST_02844)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdet03032
]
87939347 (CDEST_02844)
03400 DNA repair and recombination proteins [BR:
cdet03400
]
87939347 (CDEST_02844)
Enzymes [BR:
cdet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
87939347 (CDEST_02844)
DNA replication proteins [BR:
cdet03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
87939347 (CDEST_02844)
DNA repair and recombination proteins [BR:
cdet03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
87939347 (CDEST_02844)
Bloom's syndrome complex (BTR)
87939347 (CDEST_02844)
FA (Fanconi anemia) pathway
87939347 (CDEST_02844)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RQC
ResIII
HRDC
IFT57
SecA_DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
87939347
NCBI-ProteinID:
XP_062775054
UniProt:
A0AAX4I3C4
LinkDB
All DBs
Position
2:join(2060891..2061311,2061360..2064844,2064898..2066097)
Genome browser
AA seq
1701 aa
AA seq
DB search
MTRNNLGDQVSWLLSNVAISKPTALFFPPARDPLGPASSQSQSRFSSSNSQQGLPSHSIS
QSIPDFSLIGTALHAFDAVEQPQDTRVATAGSSASMARLTSSARHRKPSLAMKQQQLLTP
SSTTSGGRFQQAYTAKLQQEDAQLGRISRNPPSSSQEGRQKTAPAGTPDFLDDDDDEILD
LTGNDTIMSSDSMVFDDEVAAWNDVHAPIPDPLVKRGQKRKSTEMSKTELDSDSNSDEFP
DIYKTLGTPAPKGSRSVKGPKTIPSSIRRATTDSGVIEERTITQTISRTQRTYKMTDEGN
GSGTPRRIPMALGAQQALGRTPSKALQIPSSPESSSKIKPLNLQASTNNKQRSRPRVIQD
SDDDEFGDEEIDEELLATPSRRTGILLTARSRPSSIPLDDLELSDGLVAPDTPSRPDSSV
LQAANHRTPAEAHQMKPLPRQDMNNPLSQQSASSQGQKPAILKFILSNPDSLEAKEKMIQ
DQLEQNSKEYARVLREGSRDDRVQVKSAKELLLKQQAGLKEVSDLLRSHAMLMDERESLA
MHIADAYDEGRDTEEDENRLDGLADKVGDLEQSIGQLLPGVGIDDESFIEDYRRSKSIVM
NTQPGNKGLSRTSRDGQATTEMDNQVIHQTQFPGSSRLTDPRDCSPPPFLRGRPEPSRSA
KSLVPSVKQSRRDEFDDDFFDDIEDDFDPFHPPAPQVPRPTPNRRTPLKKTRPRAQEMSS
DYGDDTDADMLALAQDFELRQSSSAETTRGRGVLAATSGNASQLIRAIEPLKKREPAKAK
LSIPPELMKHPWSADVRKALKDRFRMRGFRSNQLEAINATLAGKDAFVLMPTGGGKSLCY
QLPAIISSGKTRGITIVVSPLLSLMQDQVDHMSALNIQAVSLNGETNAQKRNQIFSSFKE
RSPELYIQLLYVTPEMLNNSQNFMRALTNLYANKRLARIVIDEAHCVSQWGHDFRPDYKA
LGKLRHQFPTVPIIALTATATQNVIVDIKHNLGMDSCQVFSQSFNRPNLTYEVRRKEKEL
IHKIADLVMSKYNGQCGIIYTLSRKTSEQVAEKLRSQYGVKANHYHAQMTPEDRIRVQRE
WQADKIHVVVATIAFGMGIDKPDVRFVIHHSVPKSLEGYYQETGRAGRDGNPSDCILFFG
YQDVATLKKMIADGEGSEVQKERQRIMLNRVTAFCDNRENCRRVEILRYFGEVFNSDDCE
KTCDNCRAGAVFEQHDFSELANAAIRTIELHERLTINQCSEILMGKKYQRTIDPHPDDPH
GIAKGMKKHEIERILDRLTAEEALEEENVVNKRAGIAIQYLIVGRNAHLFTNGRRKLLLS
VQVSDRNREPLAPKPKKRTKRSQKDDEQDLDEEPSRRLPPSTNVSSPAQARRTLNARKKG
KSLAVIVDSDEEDEMVRHEAEDQDLSTHSNGYAKDGFVMSDNDSDDGFEPLPKSRKRGNT
SRDIGPRIQGDGRLVGLDELHQDVVHNFVEEAKQLEESLRNAQGLRKPLFSEKSFQEMAI
RWTTTLPQMCQIVGIEPEKVDKFGNKFIPLIKRFQSNYRAMIGTEDRDEDMSAGEQDIVD
LISSDENEDGEEGEEEEESSKYFSSGPPPLVPAVQEWNERMRELDTAPPSRTSSSNSTRG
RGAGARGGRRSGSRKSSSTWAGFKKQGGGVAKKKATGGASRKNGGGATVAGSKNSSMTSY
VSRGGKRGGRGRGGGIGLMPH
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atgactcgaaacaacctcggggatcaagtctcctggctgctgagtaacgtcgcgatatcc
aaacccaccgctctcttcttcccaccagctcgcgatccccttggccccgcatcatcgcag
tcgcagagccgcttcagcagctcaaactcccaacaagggcttccaagccattcgatttcc
caatcaatacccgatttttcgcttataggaaccgcacttcatgccttcgacgcggtggaa
cagccacaagatactagggtggcaacagcaggaagctctgcctcaatggcgaggctgacc
tcgtctgcgaggcataggaagccctcgctggcaatgaagcagcagcagttgctgacacca
tcctcgacgacaagtggtgggcgttttcagcaagcttatacggcgaagctgcagcaagaa
gacgcacaactagggcgaatcagccgaaaccctccgtcatcttctcaagaaggaagacaa
aaaactgcacccgcaggtacaccggatttcctcgatgacgatgacgacgaaatcctcgac
ttgactggcaatgatacgatcatgtcatcagactctatggtatttgacgacgaagttgcg
gcatggaacgacgtgcatgctccaatcccagacccgttggtaaaacgtggccagaagaga
aaaagcacagagatgagcaagacagaattggactcagactccaactcggatgaatttccg
gacatctacaagacactgggaacaccggcccccaagggtagtcgttcagtcaagggacca
aagactatcccgtcaagtattcgtcgggcgactactgacagcggcgttatcgaggaacgg
accatcacgcagacaatcagccggacgcagcgcacctacaagatgacggacgaagggaac
gggagtgggaccccgcgccgcatacctatggcactgggagcccagcaggcccttggaagg
actccgagcaaagcactacaaataccatcaagccccgaatcgagcagcaaaatcaagcca
ctgaatctccaagcgagcacgaacaacaagcaacgtagcagacctcgggttatccaagat
tccgacgacgacgagtttggtgatgaagagattgatgaggagcttcttgctacaccgagc
agacgtaccggaatactgttgacagcaagatcgagaccgtcgtcaattcctttggatgat
ttggagttgtctgacggacttgtggcccccgatactccctccaggcctgactcatcggtg
ttgcaagctgcaaatcatcgcacaccagccgaggcgcatcagatgaaacccctaccccga
caagacatgaacaacccactgtcccaacaaagcgcctcatcccaggggcagaaaccagcg
atacttaagttcatcttgagcaacccagactctctggaggccaaggagaaaatgattcag
gatcagctcgagcagaactcaaaggagtatgcaagagttctacgcgagggctcaagagat
gaccgcgtccaagtcaagagcgcaaaggagttgctgttgaagcaacaagctggcttgaag
gaagtttccgaccttctcaggtctcacgccatgctcatggatgagagagagtctcttgca
atgcatatcgccgacgcttacgatgaaggccgcgacactgaagaggacgagaatcgttta
gatggcctcgcggacaaagttggggacttggaacaatccattggccagcttcttcctggt
gttggcatagacgacgaatcttttatcgaagattatcgtagatcaaagtcgatcgtcatg
aatactcagcccggcaacaaaggtctctcccggacatcaagggatgggcaggcgaccaca
gagatggacaatcaagttatccatcagacgcagtttcctgggtcgtccagactcaccgat
cccagggattgttcgcccccgccgtttctccgaggcagacccgagccgtcgaggagcgca
aagtcacttgttccaagtgtcaagcagtcccggcgggatgaattcgatgacgactttttt
gacgatattgaagatgattttgacccatttcatcctcctgcgccacaagtgccccgaccg
acgccgaaccgccgaactccccttaagaaaacccgcccgcgtgctcaagagatgtcgagt
gattatggcgacgataccgacgcagacatgcttgcgctcgctcaggacttcgaacttcgc
cagtcttcatccgccgaaaccactaggggcaggggtgtgcttgcagcaacctcgggaaat
gctagccagctcataagggctatcgaacccttgaagaaaagggagccggcaaaagcgaag
ctgtcaatccctcccgagctgatgaaacatccatggtctgcagacgtgcggaaggccctg
aaagacagattcaggatgagaggatttcgctcaaaccagcttgaggcgatcaacgccacg
ctcgccggcaaggacgccttcgtgctaatgccgacaggcggaggtaaatctctttgctac
caactgccagctataatcagcagcgggaagacgaggggaatcacgatcgttgtatcccct
ttgctcagtctcatgcaagaccaggtggaccacatgtcagctctcaacattcaggcggtc
tctctcaacggcgaaacgaatgcgcagaagcggaaccagatattctcttcgttcaaagaa
aggagcccggaactctatatccagcttctgtacgttacgccagaaatgttgaacaacagt
cagaatttcatgagggccttgacgaatctctatgctaataaaaggctcgcacggattgtc
attgacgaagctcattgcgtcagtcaatggggtcacgatttccgcccagactataaggct
ctcggcaaactccgtcatcaattccctacagttccaatcattgcacttacggcgacggcg
acccagaacgtcattgttgacatcaagcacaatctgggcatggacagctgccaagtgttt
tcccagagcttcaaccggccaaaccttacgtacgaggttcgcaggaaagaaaaagagctg
atccataagatcgctgatctggtcatgtccaagtataacggccagtgtggaatcatctat
actctgtcgagaaagacctctgagcaggtggccgaaaaactccgatcccaatacggcgtg
aaagcaaaccattatcatgcgcaaatgacgcctgaagacagaatcagagtgcagcgagaa
tggcaagcagacaagattcatgtcgtcgtagcaacgattgcttttggcatgggcattgac
aagcctgacgtacgatttgttattcaccactcggtccccaagagtctggaaggctactac
caagaaacaggacgtgccggaagagatggcaatccctcggactgcattctgttctttgga
taccaggatgtcgccaccttgaagaagatgattgcagatggcgagggtagcgaggtgcaa
aaagaacgacaaaggattatgctcaacagggtcactgctttctgcgataaccgggagaat
tgccgtcgtgttgaaattcttcgctacttcggagaggtcttcaactctgatgactgcgag
aagacgtgcgacaactgcagagcgggggccgtatttgaacagcatgacttttctgaactt
gccaacgccgccattcggaccattgagcttcacgaacgcctgactataaatcagtgcagt
gagattttgatgggaaagaagtaccaaaggacgattgatccccatcctgacgatccccac
ggcatcgccaaggggatgaagaagcacgagatcgagcgtatcctcgacaggctcacagcc
gaagaggctcttgaagaggagaacgtagtaaacaagagggccggcatcgcgatccaatac
ctcattgttggccgcaatgctcatttgttcaccaacgggcgccgcaagctgctattgtcg
gtccaggtctctgataggaatagagaaccgttggcaccaaagccgaaaaagcggactaaa
agaagccagaaggacgacgagcaggatctagacgaggagccatcgagacgtctgccgcct
tcgacaaatgtttcctcgcccgcccaagcccgaagaactctcaacgcgaggaagaagggc
aagtctctagcggtcatcgttgattctgacgaagaagacgagatggtgcgacatgaggcc
gaagatcaggatctttctacgcactcaaacggctacgccaaagacggcttcgttatgtct
gacaacgattccgacgacggattcgagccactgcccaaatctcgcaagcgaggaaatacc
tctagggatattgggcctcgtatccaaggcgacggacgtttggtcggccttgatgagctg
catcaagacgtcgtgcacaactttgtcgaggaggcaaagcagcttgaagagtctttgcgc
aatgcgcagggtctcaggaaacctctcttttccgagaagagctttcaggaaatggccatt
cggtggacaacgactctacctcagatgtgccagattgtagggatcgagccagagaaagtg
gacaagttcggaaacaagttcatccctctgatcaagcgcttccaaagcaactacagggcc
atgataggcactgaggatagggacgaagacatgagtgcgggcgagcaggacatagtagac
ctgatcagctccgacgaaaacgaggacggtgaggaaggggaagaggaagaggaatcctcg
aagtattttagtagcggtccgcctcccctcgtgcctgccgtccaggagtggaacgagcga
atgagggaacttgacacagcccccccatctcgaacctcatcgtcgaactccacacgaggt
cgcggcgcaggtgcccggggcggccgaagatcgggctctcgcaaaagctccagcacgtgg
gcgggcttcaagaagcaagggggtggcgtagccaaaaagaaggcaactggcggtgcaagc
aggaagaacggcggcggtgcgactgttgcaggctcgaagaacagctctatgacgagctat
gtctccagaggcgggaagagaggcggccggggacgtggcggcggcattgggctgatgccg
cattga
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integrated database retrieval system
