KEGG   Colletotrichum destructivum: 87939667
Entry
87939667          CDS       T10409                                 
Symbol
CDEST_03164
Name
(RefSeq) Putative sm-like protein Lsm8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
cdet  Colletotrichum destructivum
Pathway
cdet03018  RNA degradation
cdet03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cdet00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    87939667 (CDEST_03164)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    87939667 (CDEST_03164)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdet03019]
    87939667 (CDEST_03164)
   03041 Spliceosome [BR:cdet03041]
    87939667 (CDEST_03164)
Messenger RNA biogenesis [BR:cdet03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     87939667 (CDEST_03164)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     87939667 (CDEST_03164)
Spliceosome [BR:cdet03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    87939667 (CDEST_03164)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 87939667
NCBI-ProteinID: XP_062775374
LinkDB
Position
2:join(3061056..3061083,3061157..3061233,3061317..3061511)
AA seq 99 aa
MATLGGYLNKKVLIVTSDSRILVGTLEAADQSTNLVLSAAQERVIQTPESGEPSVQVPLG
LYLVRGDNVCTIGLVDEALDDSINWTEVKGSAIGGTKHV
NT seq 300 nt   +upstreamnt  +downstreamnt
atggcgaccctcggaggttacctcaacaagaaagtccttatcgtgacttcggactcgaga
attcttgtcggcaccttggaggccgcagaccagtccaccaacctcgtcctcagcgccgcc
caggagcgagtaatccagacccccgagagcggagaaccatcggtccaggtacccctcggc
ctctacctcgtccggggcgataacgtttgcaccatcggcctggtggacgaggcactagac
gacagcatcaactggaccgaggtcaagggctccgccattggagggaccaagcacgtatga

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