Colletotrichum destructivum: 87939835
Help
Entry
87939835 CDS
T10409
Symbol
CDEST_03332
Name
(RefSeq) Putative like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3
KO
K11087
small nuclear ribonucleoprotein D1
Organism
cdet Colletotrichum destructivum
Pathway
cdet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
87939835 (CDEST_03332)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdet03041
]
87939835 (CDEST_03332)
03032 DNA replication proteins [BR:
cdet03032
]
87939835 (CDEST_03332)
Spliceosome [BR:
cdet03041
]
Complex A
U1 snRNP components
Sm proteins
87939835 (CDEST_03332)
U2 snRNP components
87939835 (CDEST_03332)
Complex B
U1 snRNP components
87939835 (CDEST_03332)
U4/U6.U5 tri-snRNP components
87939835 (CDEST_03332)
Complex C
U2 snRNP components
87939835 (CDEST_03332)
DNA replication proteins [BR:
cdet03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
87939835 (CDEST_03332)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
WHD_ArnR1
Motif
Other DBs
NCBI-GeneID:
87939835
NCBI-ProteinID:
XP_062775542
UniProt:
A0AAX4I4L8
LinkDB
All DBs
Position
2:complement(join(3704245..3704555,3704660..3704709,3704820..3704833))
Genome browser
AA seq
124 aa
AA seq
DB search
MKLVRFLMKCANETVTIELKNGTIVHGTITSVSPQMNTALRTVKMTPKGQDAVSLDTMNI
RGSTIRYFILPDSLPLDTLLIDDAPKPKNKARKEADRGTGGRGGRGGPRGRGRGGGRGRG
RGRG
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgttagatttttgatgaagtgcgcgaacgagacggtgacaatcgagctcaaa
aatggcaccatcgtccatggcaccatcacatcggtttcgccgcagatgaacacagcactg
cgcactgttaagatgacgcccaagggccaggacgccgtctcgcttgacacgatgaacatt
cgcggctcgacgatccgatactttatcctgcccgactcgctgccgctagacaccctactc
atcgacgacgcgccgaaacccaagaataaggcgcgcaaggaagcagaccgcggtaccggc
gggcgcggcggcagaggcggccccagaggaaggggaaggggcggcggtcgcggtcgcggt
cgcggacggggttaa
DBGET
integrated database retrieval system
