Colletotrichum destructivum: 87939846
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Entry
87939846 CDS
T10409
Symbol
CDEST_03343
Name
(RefSeq) Putative transcription initiation factor IIF, beta subunit, TFIIF beta subunit, HTH
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
cdet Colletotrichum destructivum
Pathway
cdet03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
87939846 (CDEST_03343)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdet03021
]
87939846 (CDEST_03343)
Transcription machinery [BR:
cdet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
87939846 (CDEST_03343)
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Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta_N
TFIIF_beta
Motif
Other DBs
NCBI-GeneID:
87939846
NCBI-ProteinID:
XP_062775553
UniProt:
A0AAX4I4Y3
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All DBs
Position
2:join(3736288..3736725,3736790..3737063,3737114..3737316,3737367..3737711)
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AA seq
419 aa
AA seq
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MQGTLLCFLPACLTSVLRSTILTALDVIAKKRLHLNLPILGRQRNLIARPSILIMADSTY
IKPEPYIKPDPEAVTASPLEDDDLYEDAGDLEFFDQYSDQGSFGQAYLARVPKDLWEAWD
SLPDDAEIEVGTMRQWDVVRPDGSVEHRFKMLLNSDRAEHQLMPKEYDLEMGKELARSTF
VFTEEDLPGFKAKSKARTDAANAGIPARFLRPKADKVEKKPFEKGRRWQPYYRKAIPKKT
KIAARIQYELACKPVDNAESQAILQRKQVEAQRPKHTLQIMEQRAANSIIHHGSAAAVEK
FGSFIKTSAPTKATKPKKAENRAARMSEEQLLDGLMEAFRRYEYWKMSILKARFDQPEAF
LRQTLEKIAVLNRSGIHANEWSLQEHLKSMASGATSETAPEEAAADDDDDDEVVMEDVV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtaccttgctctgcttcctgcctgcttgccttacctcagtgctcaggtccacc
atacttactgccttggacgtcattgcaaagaaacgacttcacctcaacctcccgattctg
ggacgccaaaggaacctcatagccagaccatccattctcatcatggcggactctacgtac
atcaaaccagagccatacatcaagcccgaccctgaagctgtgacagcttctcccctcgaa
gacgacgacctttacgaagatgccggcgatcttgagtttttcgaccaatatagcgaccag
ggatcctttggccaagcatatttagcccgagtccccaaggacttgtgggaggcatgggac
agcctgccagatgacgccgaaatcgaggttggcactatgcgacagtgggacgttgtgcgc
ccagatggcagcgtagagcaccgcttcaaaatgcttcttaattccgaccgagccgagcac
cagctcatgcccaaggaatacgatttggagatgggcaaggagcttgcgcgcagcacgttc
gtcttcaccgaagaagacctgcccggcttcaaggcgaagtcgaaggcgagaaccgatgcg
gcaaatgctggtattccggcccggttcctgcggcccaaggccgacaaagtagaaaagaaa
ccgtttgagaagggtcgtcgttggcagccctattaccgcaaggcaattcccaagaagacg
aagatcgccgcccggattcaatacgagctagcttgcaagcctgtcgacaatgccgagagt
caagcaatcctgcagcggaagcaagttgaggcccagcggccgaagcacacacttcagatc
atggagcagcgcgcagccaacagcattatccaccatgggtctgctgccgccgtggagaag
tttggctctttcattaaaacgtctgcgcccacaaaggccacgaagcccaaaaaggccgag
aacagagctgcccgtatgtcggaggaacagcttctcgacggcctcatggaggctttcagg
aggtacgagtactggaaaatgtccattctcaaggccagattcgatcagcccgaggctttc
ttgcgccagactttggagaagatcgcagttctcaaccgatccggcattcacgccaacgag
tggtcgctacaggaacacctcaagagtatggcctccggcgcgaccagcgaaaccgcccca
gaggaggctgctgccgacgacgacgatgacgacgaagtggttatggaggacgttgtgtaa
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