Colletotrichum destructivum: 87939859
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Entry
87939859 CDS
T10409
Symbol
CDEST_03356
Name
(RefSeq) Putative PWI domain-containing protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cdet Colletotrichum destructivum
Pathway
cdet03013
Nucleocytoplasmic transport
cdet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
87939859 (CDEST_03356)
03015 mRNA surveillance pathway
87939859 (CDEST_03356)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdet03019
]
87939859 (CDEST_03356)
03041 Spliceosome [BR:
cdet03041
]
87939859 (CDEST_03356)
Messenger RNA biogenesis [BR:
cdet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
87939859 (CDEST_03356)
Spliceosome [BR:
cdet03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
87939859 (CDEST_03356)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
87939859
NCBI-ProteinID:
XP_062775566
UniProt:
A0AAX4I4M6
LinkDB
All DBs
Position
2:join(3774901..3775004,3775057..3775147,3775205..3775369,3775425..3776375)
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AA seq
436 aa
AA seq
DB search
MATGVDAKLLKSTKFPPEFNQKVDMQKVNLQVMKKWIASKISDILGSEDDVVIELCFNLI
EGSRYPDIKSLQIQLTGFLDKDTAPFCKDLWKLCLSAQTSPQGVPKELLEAKKLELIQEK
MEANRAADEARRRREDTERREEVHRLRDRDRGDRGRGRGGDAWRGRRGDRDYDHRGRPGP
RFGENRSRSPAPRHRDTRDRGSFRESARDSYVPRNRVSSGRGPGRRRTVTRSPSSAPASA
RSASRSRSAERKRESSRGSPSPAHRRSRRDRDPPSPRPARNRSTSLNRSEGGYRDSRRKR
GSTRSASTPSPSSDKRPATKRRRYSSSRSRSPDHKRRSRSRSSGSESSRSSRYRSRSPRR
RPYYGRAVSNSRSGPPGRDGSSVPHSPGIERRKRKPDEEEQGKDGSRKDRQEDAMSGSRR
RNSSSASSRSADHSKR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgggtgttgatgcaaagcttctcaaatccaccaaattcccgccggaattcaat
cagaaggttgacatgcagaaagtcaacctccaggtgatgaaaaagtggatagccagcaag
atctccgatattctgggcagcgaagacgatgtggtcatcgagctttgtttcaatttgatt
gaagggtcacgatatcccgacatcaaatctcttcagatacagctcacgggatttttggac
aaggatacggcaccattctgcaaagacctgtggaagctatgcttgagcgctcaaacaagc
ccgcaaggcgtgcccaaggaactgctcgaggccaagaagctggaattgatacaggaaaag
atggaagccaatcgtgcagcagacgaagcccgccgacgccgagaagacaccgaaagacgc
gaagaagttcacagattgagagaccgggatcgcggcgaccgcggtcgtggtcgcggtggg
gatgcgtggcggggtcggcgaggcgacagagactacgatcatcgaggtaggcctgggcca
cgcttcggcgaaaacagatcgcgctcgccggcaccgagacatcgcgatacaagagataga
ggctcgttccgtgaatctgcacgagacagctacgttcccagaaaccgagttagtagcggt
cgaggccctgggcgtcgacgcaccgtcacacgctcaccctcttcggcgcctgcatccgca
cggtctgcctcacgcagtaggagcgcggagcggaagcgagagtcgagtcgcgggtctccc
tccccggcccatcgaagatctcggcgagaccgtgacccacccagtcccaggcctgcgagg
aatcggtccacgtcattgaataggagtgaaggtggctatcgcgactcacgacggaaacga
ggatcaacgaggagtgcgtcaacgccgtcaccgtcgtctgataaaaggccagctaccaag
cggcgcaggtactcctcgtctcggagccgctcccctgaccacaagagacgatcccgcagt
agatcatcaggctcagaatcttcccgaagctccagatatcggagtcgaagtcccagacgc
cgaccttattatggccgtgcagtctcgaattctcgaagcggccccccgggccgcgatggt
agcagcgtgcctcactctccaggcatcgagaggcgtaagagaaagcccgacgaagaagag
caaggaaaggatggcagtaggaaggaccgacaagaggatgctatgagtggaagcaggaga
cgcaactcatcgtccgcttcatcgagatcagctgatcattccaaaagatga
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integrated database retrieval system
