Colletotrichum destructivum: 87940024
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Entry
87940024 CDS
T10409
Symbol
CDEST_03521
Name
(RefSeq) Putative mRNA 3'-end-processing protein Rna14
KO
K14408
cleavage stimulation factor subunit 3
Organism
cdet Colletotrichum destructivum
Pathway
cdet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
87940024 (CDEST_03521)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdet03019
]
87940024 (CDEST_03521)
Messenger RNA biogenesis [BR:
cdet03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
87940024 (CDEST_03521)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_C
PRP6_TPR
UTP6_C
HAT_Syf1_CNRKL1_C
TPR_16
TPR_19
HAT
TPR_9
Motif
Other DBs
NCBI-GeneID:
87940024
NCBI-ProteinID:
XP_062775731
UniProt:
A0AAX4I551
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All DBs
Position
2:complement(join(4343614..4344641,4344697..4345714,4345765..4346196,4346250..4346957))
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AA seq
1061 aa
AA seq
DB search
MDSELPHNDQDFEGASWGEEGYEEANDIQHSDQQSQDPAFPLAQAANGDSEDAGEYDPES
VTITSVPETAESTPTPIPTPTTSTSAKPKSGKPKTQGGFLVGDSDDEEDAPTPASTAAVA
AGVAQAPIAQNHPPLPVPTPVESQVGVTPEQPNNGIAVRAPSAASSAAHAPPPPTVHPVP
SRDPNDTFGILEDRVKEDPRGDMEAWLALIAEHRRYDQLDELRGVYERFIEVFPQAADIW
ADWAQLELSSNRFQDAEALFNRSLVNVPNVKLWTVYLNYIRRRYDLNNDPNGEARRILSM
SYDFVIGSVGIDRDSGQLWKDYIQFIKSGPGQVGGSGWQDQQKMDQLRKAYHRAITVPMS
ALTDLWKDYDQFEMSLNKTTGRQFIQKRSPAYMTAKAANSQLDRLIPRLQRTSLPRLPPA
PGFDGDQEFMEQVEIWKKWINWEKDDPLVLLDEEPEAYKARILYCYRQALMALRFWPEMW
VDAAEWCFANNITKDGKDLGLSFLTDGIEANPESVLLALKHGDRVEMTFPAGDDDASKAA
RAKAIREPYSRVLDTLYAMSKKIKEREEREVRKIEEAAARDPNVKDSIENNDDDLDGDNR
GPADLGKEERIKAVKHGFSVQADMLKRTISFVWIALCRAARRTQGKGNTTSGLRQVFIEA
RGRGQLTSDVYIAVAKMEALIYNDPAGGKIFDRGAKLFPEDASFMLEYLKFLHSKGDTTN
ARVVFETCVNRLTQKDDAKKNQAKQLYSYFHKYESQFGELSSIAELEKRMSELWPADPKL
AHFASRFSVETFDPIAYRLIISPAVQLRPKMLIPAVEQPTSVRQTPMALPVRQTASPGPQ
YTGPQYMGVTNSPKRPFAGDDYEELNRPRKLARGESPLKGAAGRRLDQQRRNQGAPLSRD
ITFLLGILPPSHAYAHSPGAFRLSAPNLVGLIRETPVPDYSAWKNQQELGARQNNGMQPP
SHGHQASGEYGGQGYDGRNSPQRTLSPLDGSGRRLVSSGYRSSPLRPGSRGGNQEAAAYQ
QDATQHGQVPSAASYNGTTNWAQQPVGYGQAQGQQYGRYQY
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggattccgaactcccacataacgaccaagacttcgagggtgcgtcttggggagaagag
ggatatgaggaagcaaatgatatacagcatagcgaccaacaaagtcaagatcctgccttc
ccacttgcccaagctgcgaatggtgattcagaagatgctggcgaatatgacccagaatcg
gtcacgataacctcagttccagagaccgccgagtctacccccacccccattcctactcct
accacgtccacgtccgcgaagccgaaatcaggcaagcccaaaacgcaaggtggcttccta
gtgggagactctgacgacgaggaagacgcgccgaccccggcttccaccgccgctgtggct
gcaggtgtcgcgcaagcccccattgcccagaaccaccctccccttcctgtacctactcca
gttgagagccaagtgggcgtcacaccagagcaaccaaacaatggaattgccgtgagagcg
cccagcgcagcatccagtgctgcgcacgcaccgcctcctccgactgtgcaccctgtcccg
agcagagaccccaatgacacctttggcattctggaggatcgtgtgaaggaggaccctcgg
ggcgatatggaggcctggcttgcgctgattgccgaacaccgccgctacgaccagctggac
gagttgcggggagtgtatgaacgtttcatagaagtctttccccaggccgcagacatctgg
gcagactgggcacagctcgagctgagttccaaccgcttccaggacgccgaagcccttttc
aaccgatccctggtcaacgtaccaaacgtcaagctctggactgtgtacctcaactacatt
cggagaagatatgacctcaataacgaccccaatggcgaggctcgccgtatcctgagcatg
tcatacgacttcgtcattggttccgtcggcatcgatcgggactcgggtcaattgtggaag
gactacattcagttcatcaagagtggcccaggccaagttggaggcagtggatggcaagac
cagcagaagatggaccagctgcgcaaggcctaccatcgcgccatcacagtccccatgtcc
gcgctcaccgacttatggaaggactatgaccaattcgagatgagcctcaacaagacaact
ggccgccagttcatccagaagcggtcgccggcatatatgacggccaaggcggcgaactcc
cagctcgatcgcctgatccctagacttcagcggacctctcttccacgacttccccctgct
cctggattcgatggtgaccaagagttcatggaacaggtagagatctggaagaaatggatc
aattgggagaaggacgatccgttggtgcttcttgacgaagagcctgaagcctacaaagct
cgtatcctgtactgctacagacaagccttgatggctcttcgattctggcccgaaatgtgg
gtggatgctgcggagtggtgcttcgccaacaacattaccaaggacggcaaggatcttggt
ctttcattcttgacggacggcatcgaggccaaccctgaaagcgtcctgctggcgctgaag
cacggtgatcgcgtggagatgacgtttcccgccggagacgacgacgcgagtaaggctgcc
cgtgccaaagcaattcgcgagccttacagccgggttcttgacacattgtacgccatgtcc
aagaaaatcaaggaacgggaggaacgggaggttcgcaagatcgaagaggctgctgcgcgc
gatcccaatgtcaaggattcgatcgaaaacaacgacgatgatcttgatggtgacaaccgc
ggaccggctgatcttgggaaggaggaacgtatcaaggccgtcaagcatggcttttcggta
caagcggatatgctcaagcgcaccatctcgttcgtgtggattgcactttgccgagctgcg
cggagaacacaaggcaaaggcaatacgacctcgggcctcagacaggttttcatcgaagct
cgcggtcgggggcagctcaccagcgatgtttacattgctgttgcgaagatggaggccctt
atctacaacgacccagctggtggcaagatcttcgatcgcggtgccaagctgttcccggaa
gacgccagcttcatgctagagtatctcaaattcttgcactcgaagggcgacacgacaaat
gctcgcgtggtgttcgagacctgcgtcaaccgcctcacacagaaggacgacgccaagaag
aatcaggccaagcagctttactcctacttccacaaatacgaatctcaattcggcgagctg
tcttcaattgcggagcttgagaagcgcatgtcggagctttggccggccgacccgaagctc
gcgcactttgcgagccgcttctcggttgagactttcgaccccattgcctatcgcctcatt
atctcgccggctgtccagctgcggccgaagatgctgatcccggccgttgagcagccaacc
tcagtgcgacaaactcccatggcgctaccggttcgccagacggccagcccagggcctcag
tacacaggacctcagtacatgggcgtcacgaactcgcctaagagaccgtttgcgggtgac
gactacgaagagctcaaccgcccacggaagcttgccaggggagagtcgccgctgaagggt
gccgctggccgccgtctcgaccagcagagacggaaccaaggagcgcccctttcccgagac
atcacctttctgctgggtatcctacccccctctcatgcgtatgcgcactcccctggtgca
ttccgtctgagcgcccccaacctcgtcggtctcataagagagaccccggtgccagactac
agtgcctggaaaaatcagcaggagctgggagctcgacaaaacaacggtatgcaaccccct
tctcatggccatcaggcctctggtgaatatggtggacaaggatacgatggacgaaactcg
ccgcagaggactcttagtccacttgatggcagcggtcggcgcttggtgtcgtccggttac
cggagctctcctctccgacctggttccaggggcggaaatcaggaagccgctgcgtaccaa
caggatgcaactcagcatggacaagtcccgtcagcggcttcgtacaatgggacaaccaac
tgggcacagcagcctgttggctacggccaagcacaggggcagcaatatggcagatatcag
tattga
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integrated database retrieval system
