Colletotrichum destructivum: 87940134
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Entry
87940134 CDS
T10409
Symbol
CDEST_03631
Name
(RefSeq) Putative tetratricopeptide-like helical domain superfamily
KO
K12600
superkiller protein 3
Organism
cdet Colletotrichum destructivum
Pathway
cdet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
87940134 (CDEST_03631)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdet03019
]
87940134 (CDEST_03631)
Messenger RNA biogenesis [BR:
cdet03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
87940134 (CDEST_03631)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_22
TPR_CcmH_CycH
TPR_16
TPR_2
TPR_1
TPR_14
TPR_12
TPR_8
CFAP70_mid_TPR
TPR_11
CFAP70_TPR_C
TPR_7
ARM_TT21_5th
ARM_TT21_N
ANAPC3
TPR_Psidin_N
ARM_TT21_C
CABIN1_N
RMD1-3
ARM_TT21
T7SS_EccA1_N
RPN6_N
DUF3517
Peptidase_A3B
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
87940134
NCBI-ProteinID:
XP_062775841
UniProt:
A0AAX4I660
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All DBs
Position
2:join(4716047..4716165,4716231..4720353)
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AA seq
1413 aa
AA seq
DB search
MSGAKAALKAIGDSVKQQKWDDAIQRATEFLEREPKNYQATIFLAFALDKKNRVDDSERA
YKSASLLRPKDSQAWQGLIKLYEKQDRKRLGAYQQAAIRLAELYRDSDDMYKCQDVIDKF
IDFTRSQGDTSQYIEALSVILPGSPIYPALEGRVPHPAKTYETMAQIIEADEKKRINTLI
GERRTRIGARLNEVTLEVKREVMAQSKLEFVYQQLINWTNDDELRRKYEEKLLQYCYDRL
LVAPAGPEKGAALQAVLKLALDMVIIKHPFRLAWEIAIDWKDAKEIKDWDVNMLRDYCSF
FPETDLYKVITGFLTSSISPFPKASPAALEAEETEEESEDDEGGGVSMVPLTEQDRILMM
TEGITTSNSLFAHRLVGDYYQHLEEYEINMELMRKSMEYLKTERIKTGMTFQNTQDAYSL
YLATALVFYQSPRHHTEAKALFEGVLGHDPSSTAALIGVGLIYEEEEDYNDAIEFFGRAL
KRDPSNLRVKTEAAWVQALKGDYETAKLQLEDSLPLIEKVSPPAKELLAQTQYRLGSCVW
NIDTSKAARKSRTGAYVYFLDALRNNLNFAPAYTSLGVYYADYANDKKRARRCFQKAVEL
SSSEVEAAKRLAQSFADEGDWDRVELVAQRVVDSGKVRPPPGSKRKGISWPFAALGVAEL
NKQEFHKSIVSFQSALRIHPDDYHSWVGLGESYYSSGRYVAATKAILNAQRLEETIPSEV
LGDTWFTKYMLANVKRELAEFDEAIGLYQDVIDSRPHEDGVAIALIQTMVDNALDSVEKG
LFGKAIHLAIDTISFASRAAASVVGTFNFWKSLADACSVFSAVQNRAVDFPAESIMALID
GGDKEAYTIFADVDKVGTGVISAKGLFSDDERLGVDLTRCIHATILCHKRAIHVSAHDLH
AQAVAYYNLGWAEHRAHICLPSSIRKKSSVYLKTAMKCFKRAIELEAGNWDFWNSLGVVT
SEISPAVSQHSFVRSLHLNERSPATWTNLGTLALLQNDMQLANEAFNRAQSTDPDYAHAW
LGQGFVALLYGKTKEARGLFTHAMEIAEASSIITRRQYPLAVFDHILTTRSTNVASLIQP
IFALGQLNNLKPQDLAYGHLATQFLERTRDTVKAVQILEKICGILEADYEVTESPKALAQ
FALAKTDLARSYLASGAYEQAIECGEMAIQLSDDESDNELTKEERKKARLSAHLTVGLAQ
YYSKDVNEALLCFESALEESDNNPDAVCLLAQVLWATGAEESREKARGALFEVIEDQPDH
VQSVLLLGVIAVLDNDEESVEAVVSELQGLRTSHKVGDIEQSHIGEVLGAITKLGETSTD
EDVMTQIQTDIMLYPHLPHGWSNLAEFGGEQYAAEMALTVAKKGAPPRGTLEAEDLAKTY
AGTGVAADAQTAIFLSPWKTDGWNSLRDAVYGN
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgccaaggctgccctcaaggccattggcgactctgtgaaacaacagaaatgg
gacgatgctatccaaagggcaactgaattcctcgagcgagagccgaagaactaccaggca
accatctttctcgcctttgctcttgacaagaagaaccgcgtcgatgactccgagagggcg
tacaagtctgcttcattgctgcggcctaaagacagccaggcatggcaaggtcttatcaag
ctctacgagaagcaggaccgcaaacgcctaggcgcatatcagcaagctgccatcagattg
gccgagctctatcgggattccgacgatatgtacaagtgccaggatgttatcgataaattc
atcgactttacgagatcccagggagacacttcgcaatacatcgaggctctcagcgtcatc
cttccgggtagccccatctatcccgctcttgagggacgggtaccacacccagccaagacc
tacgagacaatggcacaaatcatcgaggccgacgaaaagaagcgcatcaacaccctgatc
ggcgagcgccggacaagaatcggcgcacgcctgaacgaggtgactcttgaggtcaagcgt
gaggtcatggcccagagcaagctcgaatttgtttaccagcagctgatcaactggacaaac
gatgacgaactacggcgaaagtatgaggagaagcttctgcaatactgctatgatcgtctg
ttggtagctcctgccggcccggagaagggggcagcccttcaagccgtcctcaaattggcc
ctcgacatggtcatcatcaagcaccccttccgactggcctgggagattgccatcgactgg
aaggacgcaaaagaaatcaaggactgggatgtcaacatgttgagagactactgctcattc
ttccccgagaccgatctctacaaagtcatcaccggcttcttgacgagcagcatctcaccc
tttccaaaggcatcgccagcggcactcgaggcggaagaaaccgaagaggagagcgaggac
gacgagggaggtggcgtgtcgatggtgcctctgacggagcaggatagaatcctgatgatg
acggagggtatcaccacatccaactcgctattcgctcaccgcttggtaggagactactat
cagcatctggaggaatacgagatcaacatggagttgatgcgcaagtcgatggaatatctc
aagacggaaagaatcaagactggcatgacgttccagaatacccaagacgcctactccttg
tatctggctacggcgctggtcttctaccagtctcctcgacaccacaccgaggcgaaggcg
ctctttgagggagtcctcggtcacgacccatcttccactgcagctctgattggagttgga
ctaatctatgaagaggaagaggattacaacgacgccatcgaattcttcgggcgtgccctc
aagagagacccctctaacctccgggtcaagactgaagctgcttgggtccaggctctgaag
ggggattacgagacggccaagttacagttggaggactcacttcctctcatcgaaaaggtg
tcgccgccagccaaggaacttctcgcgcaaacacagtaccgcctggggtcctgcgtctgg
aacatcgacacgtcgaaggcagcccgaaagagccgcacgggtgcttacgtgtacttcctg
gatgccttgaggaataacctcaacttcgcgccggcctacaccagcctcggcgtctactat
gccgactatgccaacgacaagaagagagcacgacgatgctttcagaaggccgttgagctt
tcttcctccgaggtcgaagccgccaagcgtctcgctcaatctttcgcggacgaaggcgat
tgggacagagtcgaacttgtggcccaacgtgtggttgactcaggcaaagttaggccacct
ccaggctccaaaaggaagggcattagttggccttttgccgcgcttggtgtcgccgagttg
aacaagcaagaattccacaaatccattgtctcattccagtcagccttgagaattcatcca
gatgactaccactcctgggtcggcttgggcgagagctactactcttcaggtcgatacgtt
gcagcaacaaaagccattctcaacgcgcaaagattggaggaaacgatcccctccgaggta
ctcggcgacacatggtttaccaaatacatgcttgctaatgtcaagcgtgagctggctgaa
ttcgacgaagccatcggtctctatcaagacgttattgatagtcgaccccacgaggatgga
gttgcaattgctttaatccagaccatggttgacaatgcgctggattctgtcgagaagggc
ctttttggtaaggcgatacaccttgccatcgatactatcagctttgcctcaagggcagcc
gccagtgtcgtcgggaccttcaacttctggaagtcgctggccgacgcttgctccgtcttc
tctgcagtccaaaatcgagcagttgacttcccagcagagtccatcatggccctcattgac
ggcggcgacaaggaagcctacaccatcttcgccgatgtcgacaaagtcggtactggagtc
atttctgcaaaggggctgttctccgatgatgagaggcttggtgtcgacttgacaagatgc
atccatgcgacaatcttgtgccacaagcgtgccatccatgtctcagcccacgacctccat
gctcaggctgttgcctactacaacctcggctgggccgaacaccgggcccacatatgcctg
ccttcaagtattaggaagaagtcgagcgtgtacttgaagactgccatgaagtgtttcaag
cgggccatcgagcttgaggccggaaattgggacttttggaactccctgggtgtcgtgaca
agcgagatcagtcctgctgtgtcgcaacactcgttcgtccgaagcctccacctgaacgag
aggagcccagcaacatggaccaatcttggaactttggcgcttctgcagaacgacatgcag
ctggccaacgaggccttcaaccgagcgcagtcaacggatcccgactacgctcatgcgtgg
ctcggtcaaggtttcgtggctctcctctacggaaagacgaaggaagcaagaggcctgttc
acccatgccatggagatcgctgaggcttcttctatcatcaccagacgccagtacccgttg
gccgtgttcgaccatattctgactacaaggtccaccaacgtggcgtccttgatccaacca
atcttcgctcttggccagcttaataatttgaagccacaagatttggcatacggacatctg
gcgacccaattcctcgagcgaactcgagatactgtcaaggcggttcaaatacttgaaaag
atttgcggcatcctggaagccgattacgaagtgacggaatctccaaaagctctggcccaa
ttcgcgctagccaagacagatctggcaagatcgtaccttgcttctggtgcttacgagcag
gctatcgagtgcggcgagatggcaatccagctgagcgacgatgaatcggacaacgagctg
accaaggaagagcgcaagaaggcccgtctttccgcccacctgacagtgggattggcgcaa
tactacagcaaggatgtcaacgaggcgcttttgtgcttcgagtcagcgctcgaggaatcc
gacaacaaccctgacgcagtgtgcctccttgcacaggttctgtgggcgacgggcgcagag
gagtctcgcgagaaggctcgcggtgctctcttcgaggtgattgaggaccagcccgaccac
gtccagtccgtcctcctgctgggcgtcatagccgtcctcgacaacgacgaggaatctgtc
gaggcggttgtgtccgagcttcaaggcctccggaccagccacaaggttggagatattgaa
cagtctcacatcggcgaggtactcggggccatcacgaaactcggggagacgagcacggat
gaggatgtcatgacccaaatccagacagacatcatgctgtatccccacttgccgcacggc
tggtcgaacctagcggagtttggtggagagcaatatgctgccgagatggcgttgacagtg
gcgaagaagggagcgccgcccagaggaacgctcgaggccgaggatctagccaagacatat
gcgggtaccggggtcgctgcagacgcgcagacggccattttcttgtcgccttggaagact
gatggatggaactcattgcgggatgccgtctacggcaactga
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