Colletotrichum destructivum: 87941172
Help
Entry
87941172 CDS
T10409
Symbol
CDEST_04669
Name
(RefSeq) Putative histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
cdet Colletotrichum destructivum
Pathway
cdet03082
ATP-dependent chromatin remodeling
cdet03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
87941172 (CDEST_04669)
03083 Polycomb repressive complex
87941172 (CDEST_04669)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cdet03036
]
87941172 (CDEST_04669)
Chromosome and associated proteins [BR:
cdet03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
87941172 (CDEST_04669)
Histone modification proteins
HAT complexes
HATB complex
87941172 (CDEST_04669)
HDAC complexes
Sin3A-HDAC complex
87941172 (CDEST_04669)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
87941172 (CDEST_04669)
PRC2.2
87941172 (CDEST_04669)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
87941172 (CDEST_04669)
Heterochromatin formation proteins
Other heterochromatin formation proteins
87941172 (CDEST_04669)
Chromatin remodeling factors
NuRD complex
87941172 (CDEST_04669)
NuRF complex
87941172 (CDEST_04669)
NuRF complex (fruit fly)
87941172 (CDEST_04669)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_EIPR1
CAF1C_H4-bd
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
NBCH_WD40
WD_LRWD1
Beta-prop_SPT8
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_DCAF12
MIOS_WD40
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
87941172
NCBI-ProteinID:
XP_062776879
UniProt:
A0AAX4I8M0
LinkDB
All DBs
Position
3:complement(join(1914053..1914227,1914284..1914769,1914827..1915342,1915393..1915444,1915502..1915555,1915608..1915641))
Genome browser
AA seq
438 aa
AA seq
DB search
MAPAQVVDDVDVDMVQEEDEDQEQRLINEEYKTWKKNSPFLYDMILSTALEWPTLTSQWF
PDVKEPEDKNYRIHRLLLGTHTSEGLPNHVQIAEVKIPKSVAPSPDEYNEETGEIGGYGK
SSNGQTAAVEFSIVQKIDHPGEVNKARYQPQNPDIIATLCVDGKVLIFDRTKHSLQPTGK
VNAQVELIGHKQEGFGLAWNPHEEGCLASGSEDTTVCLWDLKTIQSGSHTLKPARKYTHH
TQIVNDVQYHPIAKSFIGTVSDDLTMQIIDVRQSETARAAVTAKRGHMDAINALAFNPTS
EVLVATASADKTLGIWDLRNVKEKVHTLEGHNDAVTSLSWHPQEAGILGSGSYDRRVIFW
DLSRVGEEQMPDDQEDGPPELLFMHGGHTNHLADFSWNPNEPWLVCSAAEDNLLQIWKVA
DSIVGKDDGDLPLDEIDR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcacccgctcaagttgttgacgatgtcgacgtcgacatggtacaggaggaggacgag
gaccaggagcagcgtctcataaacgaagagtacaagacatggaagaagaacagtcctttt
ctctacgacatgattctcagcacggctctcgaatggcctacccttacctcccaatggttc
cctgacgtcaaggagcctgaagacaagaactaccgcatccacagacttctcctcggaacc
catacttccgagggccttcccaaccacgtgcagatcgccgaagtgaagatccccaaatcc
gtcgccccgagccccgacgagtataacgaggagacaggagagattggaggctatggaaag
tcgtcgaacggtcagacggctgccgtcgagttcagcatcgtgcagaagatcgaccatcct
ggcgaggttaacaaggcgcgttatcagcctcagaaccccgacataatcgcgacattgtgc
gtcgacggcaaggtccttatctttgaccgtacgaagcacagcctgcagcccactggaaaa
gtcaatgcccaggtcgaactcattggccacaagcaggagggatttggtctggcgtggaac
cctcatgaggagggctgccttgcgtctggcagtgaagacaccaccgtgtgtctatgggat
ctcaagactatccagagcggaagccacacgctgaagcccgcccgcaagtacacacaccac
acccagatcgtcaacgatgtgcaatatcatccgattgcgaagagcttcatcggaaccgtc
tcggacgacttgaccatgcagatcatcgacgtgcgtcaatccgagaccgctcgtgccgct
gtcaccgctaagcgtggccatatggatgccatcaacgctctggcattcaaccctacatcg
gaagtactcgtcgcaacagcgtccgctgacaagactttgggcatatgggaccttcgcaac
gtcaaggagaaggttcacacgctagagggacacaatgacgcagtcacgtctctctcgtgg
cacccgcaggaagccggcatcctgggcagcggctcctacgacagaagggttatattctgg
gatctctcgcgtgttggagaggaacagatgccggacgatcaagaagacggccccccggaa
ttgctctttatgcacggcgggcacaccaaccaccttgcagacttcagctggaaccccaac
gagccttggctcgtttgcagcgccgctgaggacaatctgctccagatctggaaggttgcc
gactccatcgtcggcaaggacgacggcgatctgccgctcgacgagatcgaccgatag
DBGET
integrated database retrieval system
