Colletotrichum destructivum: 87941212
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Entry
87941212 CDS
T10409
Symbol
CDEST_04709
Name
(RefSeq) Putative small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
cdet Colletotrichum destructivum
Pathway
cdet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
87941212 (CDEST_04709)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdet03041
]
87941212 (CDEST_04709)
03032 DNA replication proteins [BR:
cdet03032
]
87941212 (CDEST_04709)
Spliceosome [BR:
cdet03041
]
Complex A
U1 snRNP components
Sm proteins
87941212 (CDEST_04709)
U2 snRNP components
87941212 (CDEST_04709)
Complex B
U1 snRNP components
87941212 (CDEST_04709)
U4/U6.U5 tri-snRNP components
87941212 (CDEST_04709)
Complex C
U2 snRNP components
87941212 (CDEST_04709)
DNA replication proteins [BR:
cdet03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
87941212 (CDEST_04709)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
MIF4G_like_2
Hfq
Motif
Other DBs
NCBI-GeneID:
87941212
NCBI-ProteinID:
XP_062776919
UniProt:
A0AAX4I9N0
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All DBs
Position
3:join(2050515..2050537,2050601..2050811,2050894..2050973,2051067..2051109)
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AA seq
118 aa
AA seq
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MSTDPKIQELLTKTRNELTEYEIAQLEEHEFSAGPLSILQTAVRSHTQVLISIRNNRKLL
ARVKAFDRHCNMVLENVKEMWTETPRLANGKKGRPVNKDRFISKMFLRGDSVILVLLS
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgatcccaagatccaggagctcctcaccaagacccgcaacgagctcaccgag
tacgagatcgcccagctcgaggagcatgagttcagtgccggacctctctcgatcctccag
accgccgtgcgcagccacacccaggttctgatctccatccgaaacaaccgcaagcttctt
gcgcgcgtcaaggcctttgacaggcactgcaacatggttctcgagaatgtcaaggagatg
tggacagagaccccgcgccttgccaacggcaagaagggccgccccgtcaacaaagaccgc
ttcattagcaagatgttcctccgtggtgatagcgtcattctggttcttctgagctga
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