KEGG   Colletotrichum destructivum: 87941260
Entry
87941260          CDS       T10409                                 
Symbol
CDEST_04757
Name
(RefSeq) Putative LSM domain superfamily protein
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
cdet  Colletotrichum destructivum
Pathway
cdet03018  RNA degradation
cdet03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cdet00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    87941260 (CDEST_04757)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    87941260 (CDEST_04757)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdet03019]
    87941260 (CDEST_04757)
   03041 Spliceosome [BR:cdet03041]
    87941260 (CDEST_04757)
Messenger RNA biogenesis [BR:cdet03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     87941260 (CDEST_04757)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     87941260 (CDEST_04757)
Spliceosome [BR:cdet03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    87941260 (CDEST_04757)
SSDB
Motif
Pfam: LSM SM-ATX LSM12_LSM
Other DBs
NCBI-GeneID: 87941260
NCBI-ProteinID: XP_062776967
LinkDB
Position
3:complement(join(2222157..2222192,2222245..2222308,2222361..2222388,2222449..2222487,2222547..2222603,2222653..2222677))
AA seq 82 aa
MASQLLPLELIDKCVGSRIWVVMKGDKEFSGTLLGFDDYVNMVLEDVTEFDYSGNHTKLP
KILLNGNNICMLIPGGEGPVTA
NT seq 249 nt   +upstreamnt  +downstreamnt
atggcgtcacaactcctccctttggaactcatcgacaagtgcgttggatcgagaatttgg
gtcgttatgaagggcgacaaggagttcagcggcacgctcctcggatttgatgactacgtc
aacatggtgttggaggacgtcacagagtttgactattcgggaaaccacacaaagctgccc
aagatcctcttgaacggcaacaacatctgcatgcttattcctggaggagagggaccggtg
accgcataa

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