Colletotrichum destructivum: 87941339
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Entry
87941339 CDS
T10409
Symbol
CDEST_04836
Name
(RefSeq) Putative nuclear pore complex component
KO
K18724
nucleoporin POM34
Organism
cdet Colletotrichum destructivum
Pathway
cdet03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
87941339 (CDEST_04836)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdet03019
]
87941339 (CDEST_04836)
Messenger RNA biogenesis [BR:
cdet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
87941339 (CDEST_04836)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPCC
Motif
Other DBs
NCBI-GeneID:
87941339
NCBI-ProteinID:
XP_062777046
UniProt:
A0AAX4I8X9
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Position
3:join(2480499..2480740,2480792..2481353)
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AA seq
267 aa
AA seq
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MSSSGGRAAITTPVRSTPQKSTPIVDSPGTWRHPRLNEITRRRNATTFSEKNVRRIALNI
GFLLSLWLSQILTKSYIPAQWLSAPLRSYLGWAYYLVQLFPLANIGMAMLPLFRSEDDLS
DIPLTPAQRKLLGLPPSSTAATPDAVYSTPPRYSRTPSLAGSPASNRSFSGSPLSGRGSP
ALGSSLNGQSYSPSPLNNSPSKFSASLNSNRRSSFGSSTNLGASTSSSLFPDPGTPSPSA
GKRTSVGLNNKWLYERGRRSSGSNWMH
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcagggggccgagcggctatcaccactcccgtcagatcgacgccacagaag
tccacccccatcgtcgacagcccgggcacttggagacacccgcgcctcaatgagatcaca
aggcggcgcaatgcaacaaccttctccgagaagaacgtgagaaggattgccttgaacatt
ggatttcttctcagcctctggctttctcagattctcaccaaatcgtacatccccgcacag
tggctcagcgctcccctacgatcctatctaggctgggcgtactatttggtccagctcttt
ccgctcgccaacattggcatggccatgctgccactcttccgatccgaggacgacctgtcg
gatattcctctgacccccgcgcagcgcaagcttctcggcctgccgcccagctcgacggca
gcgactcctgatgccgtctacagcacaccgccacgctactcgcgcactccgtctttggcg
ggctcacctgcgagcaacagaagcttctctggatccccgctgtccggcaggggcagcccg
gctctcgggagctccttgaacgggcagtcgtactccccctctccactcaacaacagccca
tccaagttctcggcaagcctcaacagcaaccggcgatcatcctttggctcttcgacaaac
ttgggggcaagcacgagttcttccctcttcccggacccaggcacgccgagcccttcagct
ggaaaacgcaccagcgtcggcttgaacaacaagtggctttacgaaaggggcaggcggtcg
tcaggcagcaactggatgcattga
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