Colletotrichum destructivum: 87941459
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Entry
87941459 CDS
T10409
Symbol
CDEST_04956
Name
(RefSeq) Putative helicase, Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
cdet Colletotrichum destructivum
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cdet04121
]
87941459 (CDEST_04956)
Enzymes [BR:
cdet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
87941459 (CDEST_04956)
Ubiquitin system [BR:
cdet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
87941459 (CDEST_04956)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ferritin_C144_05
SNF2-rel_dom
zf-C3HC4
Helicase_C
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-rbx1
ResIII
zf-C3HC4_4
zf-RING_5
zf-ANAPC11
SWI2_SNF2
zf-RING_4
EspB_PPE
DUF1244
STAT1_TAZ2bind
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
87941459
NCBI-ProteinID:
XP_062777166
UniProt:
A0AAX4I9A2
LinkDB
All DBs
Position
3:complement(join(2867883..2868462,2868513..2868969,2869032..2872316,2872364..2872433))
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AA seq
1463 aa
AA seq
DB search
MGRSRQTARRGKPVVKTPIIAFHEPWPVEFISQLHILPVDDDDEGQSQGKAVTEPQRKRV
KRSGGDVESLLVAREELKLGRKCPKGAPINDPHHSHHRNIGSNLSIFVNQSKELKIVARP
QSDVPPINVSVAIHSHTINDRLAACIDVFANHRTRAVKEGQIWVSLDAVLSTQEEFLNIT
FCFSIYWNETKTPYSWLRSSSERKISQRILDVFLPDGTSSSAMRPKRESWSPLDFYEAAH
VPAADDQTALSIEVPELSATLYPYQKKTVQWLLNREGVCWNVSGPDSVSSIEDLPAPQDA
DGAYSFRKVQDPLATGRPFYVSHLYHAITTDLAPFQHAEQSVRGGILAEEMGLGKTLEII
GLITLHRRSLTEKVVHTREGEELLTTGATLIVTPDSLRQQWMEELERHAPHLKVRYYSGR
KHAKIDAEEELRVDLASQDVVITTYPILSAEVHFAMKPPERSRRQERKYERLESPLTKIS
WWRVCLDEAQMIESGVTGAAAVARVLPRINAWGVTGTPVKNDVKDLYGLLDFLRYEPYAS
SAQVWRALTESHKTLFRSLFESIALRHTKQLVRHEIAVPPQKRFVITLPFTAVEEQYYGE
MFKKMAQRCGMNTLGAPLQPKWTLEDYENEMRTWLNRLRQSALHPEIVQRRTTGRKVGPM
RTVEEVLDAMIEQSDNDIRTEHRAYLQTRLTHGQMLENSPRVKEALEIWETVKESAAVLV
VECRQELKLVLEELSAMGKSAASLSAFSTRDDASASGYDDEDEADDGSSNPRVGEARAKL
RHALEVLHKATFFCANAFFQIKSNSDMTEPDSDEFKKLQQLEDAEYGKAQEIRREILSDG
HDRAMSLIEKLGRQAHNQTFVEIPELVYTEMKGLESGPPLEMLERLHGILNEQANRIDEW
RETVIQLLRQALIDQESEVEVTGEEFIDSTKIQEELIVHVQVLRAAIADRQEAISGLENQ
LIKHETRVSLAAAENGDGPAPEKLLALYRLRDEVKPSPDDYGSLRRVVSDLRAVASRLPK
DGTGGRASTEGEIVHRHIRATQAHITSQTKVATALEREVDRFTSAMNARVEYYRQLQAVS
DSVAPYEGPNDDQAIAACVASEERHQTKLGSAKAKHRYLLNLKKEGGQSNEPRWCIICQT
YFTTGILTICGHEFCRDCLKQWYRAHHNCPMCKRKLRLTELHDITLKPRELKLHKDSLHA
DTATGMLPEASKNQVARTSGIYSHFSADKLAQINDIELASLSFGTKIDTLVRHILWLRES
DPGAKSIIFTQFRSFLDILGAAFDRYKIGFSTIDRPNGITRFKGDPGIECFMLHGRANSS
GLNLVNASHVFLCEPLLNTALELQAIARVDRIGQKNETTVWLYLIEGSVEESIYNLSVKR
RIDHMGQSSKAKFKDSTPEIQEPTLEAANTLELEQASLNRLMSRDKNAGEAVAAEDLWEC
LFGQVSQRTTADVTDGIIDEDDE
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgctcaaggcaaacagcgcgccgcggcaagccggtcgtaaaaactcccattatt
gcgtttcatgaaccatggcctgttgagttcatcagccaactacacattctccccgtcgat
gatgatgatgagggccagtctcagggcaaagcagtgactgagccacagcgcaagcgggtg
aagaggtctgggggggatgttgaatcactccttgtggccagagaggaactaaaacttggg
cgaaagtgtccaaagggagcaccgatcaatgacccgcatcattctcaccaccgcaatatc
ggatccaacctaagcatttttgtgaaccaatcgaaggaattgaaaatcgtcgctcggcca
caatccgacgtccccccgatcaatgtttcagtcgcgattcactcccacaccattaacgac
cgtttggcggcatgtatagatgttttcgcaaaccatcggaccagggccgttaaagaagga
caaatttgggtttcccttgacgctgttctgagcacccaagaagagtttctcaacatcacc
ttttgcttcagcatctattggaatgagaccaagaccccttacagttggttgcgatcttcc
agcgagcgcaagataagccagcggatccttgatgttttcttgccggatggaacctcttca
tccgccatgcgccctaagcgagaaagttggtcaccattggacttttacgaggcagcccac
gtacctgccgccgatgaccagacggcgctctcgatcgaggttccagaactttccgcaacc
ctttatccctatcagaagaagacggttcaatggcttctcaaccgggagggtgtttgttgg
aacgtctccggccctgattctgtctcctccatcgaagacctaccggctcctcaggacgcc
gatggcgcatacagtttccggaaggttcaggatccactggcaaccgggaggcctttctat
gtcagtcacctgtatcacgccataactaccgaccttgctcctttccagcatgctgagcag
tctgtcagaggcggcattctagctgaggagatgggtcttggcaaaacgctcgaaattatt
ggcctcattacgctccatcgtcggtcactcaccgagaaagttgtgcacacgagggaaggc
gaagagctcctcacgactggcgccaccctcattgttacgccggactcgttgcgacagcaa
tggatggaagaactcgagcggcatgcacctcacctgaaggtcagatactactctggacgc
aaacatgccaagatcgacgccgaggaggagcttcgagtagacttggcttcccaagacgtc
gttatcacaacttaccctatcctatcggcagaagtgcacttcgcaatgaagcctcccgag
agatctcgtcgtcaagaaagaaagtacgaacgtctagagtccccactaacgaagatctca
tggtggcgagtctgcctcgacgaggcgcagatgattgaaagcggggtcactggcgcagca
gccgtcgccagggtgcttcctcgaatcaacgcttggggcgtcaccgggacaccagtgaaa
aacgacgtcaaggacctgtacggtctgctcgacttcttgcgttacgaaccctatgcctcg
tcagcacaggtttggagagccttgacagagtcacacaaaacgctcttccgctccctcttt
gaaagcattgctctgcgtcacaccaagcagttggtcagacacgaaattgcggtaccgcca
caaaagcgattcgtgatcacattgccgtttactgccgtggaggagcagtattacggtgag
atgttcaagaagatggcccagcgttgcggtatgaatactctcggcgcccctttacagccc
aaatggacgctagaggattatgagaatgagatgcggacttggctcaaccgattgagacag
tcagccctccatcccgaaatcgtccaaaggcgaaccactggtcgcaaagtcggccccatg
cgcacagtcgaagaagtcctggatgcgatgatcgagcagagtgacaatgatatccgaacc
gaacacagggcgtacttacagactagactcacgcatggccagatgctcgaaaacagcccc
agggtaaaggaagccctcgaaatatgggaaacagtgaaggagagtgccgcagtcctcgtt
gtggaatgccggcaagagctcaagctggtgctggaagagctctctgccatgggcaagagt
gcagcctccctctcggcattcagtactcgagatgacgcctctgcttcgggttatgacgac
gaggatgaggcggatgatggttcaagcaatcctcgcgtcggcgaggctcgggcgaagttg
cgacatgctttggaagttctgcacaaagctacattcttctgtgccaatgctttcttccag
atcaagtccaacagtgacatgaccgaacccgattcagacgagttcaaaaagcttcaacaa
ctggaagatgcagaatacgggaaggcccaggagattcggcgagaaatcctgtcggatggc
cacgacagagcaatgtcactgattgaaaaattgggacgacaagcccacaatcagacgttt
gtcgagatcccagaacttgtctacactgagatgaaaggactagaaagtggcccgccgctt
gaaatgctcgaaaggctccacggcattctgaacgaacaagcaaatcgcatcgatgagtgg
agagagactgttatccaactgcttcgccaggcattgattgaccaagaatcagaggttgag
gtcaccggcgaggagttcatagattccaccaagatccaggaggaactgattgttcacgtg
caagtcttgcgtgctgccatcgccgaccgccaggaagccatctcaggacttgagaatcaa
ctaatcaaacacgagacgcgagtctcgcttgccgcggctgagaatggcgacggcccagcc
cctgagaagctccttgccctttaccgcctccgggacgaggtaaagccttctccagacgat
tatgggtctcttcgtcgcgtcgtttcggatcttcgagccgtcgcatcgcggttgccaaaa
gacggcactggcggccgggcaagcaccgagggtgagattgtgcaccggcatatcagagcc
acgcaagcacatatcacctctcaaaccaaggttgctacggctctggaacgcgaagttgac
cgcttcacgagtgccatgaacgccagggttgaatactatcggcagttgcaggctgtatct
gatagcgtcgctccttatgagggccctaatgacgaccaggctatagcagcctgtgttgcg
agtgaggagagacatcaaaccaagctcggctcagccaaggcgaagcaccgatacttgctc
aacctcaagaaagaaggaggccagtctaacgaacctcggtggtgcatcatttgtcaaaca
tacttcacgacgggtatactgacgatttgcggccacgagttctgcagagattgcttgaaa
cagtggtatcgagcacaccataactgtcccatgtgcaaaaggaagctccggctcaccgag
ctccatgacattaccctcaagcccagagagctcaaactgcacaaggacagcttgcacgca
gatacggcaactggcatgttgcctgaagcaagcaagaaccaggtcgctaggaccagtggc
atctattctcatttcagcgccgacaagcttgcgcagatcaacgatatcgaactggcctcc
ttgtcattcgggacgaagattgacactctcgtacggcacattctctggctgagagaatca
gaccccggagcaaagtccatcatctttacccaattcaggagcttcttggatattctaggc
gcagcattcgatcgctacaagatcgggttttccaccattgaccggccaaacgggatcacg
aggttcaaaggagatccaggcatcgagtgcttcatgctccacggccgggccaactcgagt
ggtctcaaccttgtcaatgcgagccatgtctttctgtgcgagccgctgctgaatacagcg
ctcgagcttcaggcgatcgctcgagtcgacagaatcggccagaaaaacgagacgacagtc
tggttatatctgattgagggctcggtggaagagtccatctacaacctgtcagtcaagcga
cgcatcgatcacatgggccagagttccaaagccaagttcaaggactccaccccagagatc
caagagcctactttggaggctgcgaatactcttgagctggagcaggcttctttgaaccgt
ttgatgagcagagacaagaacgcaggcgaagcggtcgccgcggaagacctctgggaatgc
ctgtttgggcaggtgtcgcagcgaaccacagcggacgttacggatgggatcattgacgaa
gacgatgagtga
DBGET
integrated database retrieval system
