Colletotrichum destructivum: 87941806
Help
Entry
87941806 CDS
T10409
Symbol
CDEST_05303
Name
(RefSeq) Putative CCR4-NOT complex subunit 2/3/5 domain superfamily protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
cdet Colletotrichum destructivum
Pathway
cdet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
87941806 (CDEST_05303)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdet03019
]
87941806 (CDEST_05303)
Messenger RNA biogenesis [BR:
cdet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
87941806 (CDEST_05303)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
87941806 (CDEST_05303)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
87941806
NCBI-ProteinID:
XP_062777513
UniProt:
A0AAX4IBF3
LinkDB
All DBs
Position
3:complement(join(3971450..3971509,3971563..3971704,3971756..3971959,3972012..3972327,3972380..3972846,3973353..3973497,3973588..3973731,3974114..3974126))
Genome browser
AA seq
496 aa
AA seq
DB search
MNRPGVAPQSLRGIPAGFGGQQQQQQQQQQQQQQQQQQPGRTVSNRLPNGKIGSNGSGWA
FGGGVPMGGAGLQNQGRQLGGNVSFAQSLSGSQPATPLDLSEFPSLSNNAHMNTSGQSNM
WSSTASRNLGGGGGPVPRNQQSTPLSAQSTQDELFPPTSARQGAFRFGGQNSGGPAPQAQ
SNPVDDFPPLNRNANGEIGGERGANLMPSLGFGNQASPSPAAIPPPRSAGAGNGLLNALS
ANSRPDGRSPSIVSVQDLPRTQDGSTEKSSLLREETPGDSSAQAAESRNPLGAIGNDSVT
GKAKDENDAQSPEVQDPLAGMAPIDKFGMKGLRVLMNNYPSYGALMQGMDPNEFGLNVNS
SDLISTQIYSLFDDTPPRPAIPSVRLPECYKVTNVQPIDTKIPSFNEETLFWIFYSCTQD
IKQHLAAVELHNRNWRWHKKLHVWLTKDELMMPTNIAPHLERGYYIVWDTTNWRKERREL
TLHYGDLAANLVQPTA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgaccaggagtggcccctcaatcgctgcgtggtataccagcaggctttggtggc
caacagcagcagcagcagcagcagcagcagcagcagcaacaacaacaacaacaacctggg
aggacggtgtcaaacagattaccaaatggcaagataggcagtaatggatctggctgggcc
tttggaggaggagtgcccatgggaggtgctggtctgcaaaatcaaggccgtcaacttgga
ggaaacgtgagctttgcacagagcttaagcgggtcgcaaccggcaacaccgctggacctt
tccgaatttccgtctctctccaacaacgcccatatgaacacgagcggtcaatcgaacatg
tggtcatcaacagcatcgcggaacctgggcggcggtggcggccctgtaccgcgcaaccag
cagtcgacgccactctcggcacagagcacgcaggatgagttgtttccccctacgtcggct
cgccaaggcgccttccgcttcggtggccagaacagtggaggcccagcccctcaggcgcaa
tccaacccggtagatgacttcccgcctctgaacaggaatgcgaacggtgagattggtggc
gagcgtggcgccaacttgatgccttctttgggctttggcaaccaagcgagcccctccccc
gcagcgatacctcctccccgaagtgcaggcgcaggtaatggtctgcttaacgcgctttct
gcgaatagtagaccagatggccgctccccgtcaattgtcagcgtacaggacctaccaaga
acacaagacggatctaccgagaagagcagtcttctccgcgaagaaacacccggtgacagc
tcagctcaagccgccgagagccgaaaccccctaggagctatcggtaatgactcggtcacc
ggcaaggccaaggatgagaacgatgcccagtcccccgaggtccaggatccgctggcagga
atggcgcccatcgacaagttcggcatgaagggcctgcgtgttctcatgaacaactacccc
agctacggagcgctcatgcaggggatggatcccaacgagtttggtctgaacgtcaactcg
tcagatctcatctcgacgcagatttactccctcttcgacgacacgccgccccgtcctgcg
atccccagcgttcgtctgccagagtgctacaaagtgaccaacgtccagcccatcgacaca
aagatcccgtcgttcaacgaggagactctcttttggatcttttacagttgcacgcaggat
atcaagcagcacttggctgccgtcgagctacacaacagaaactggcggtggcacaagaag
ttgcacgtctggctgacaaaggatgagcttatgatgcccaccaacattgcccctcacctc
gagcgtggctactacatcgtctgggacaccaccaattggcggaaagagcggagagagctc
acgctccactacggtgatctcgcggcgaatctggtacaaccgaccgcatag
DBGET
integrated database retrieval system
