Colletotrichum destructivum: 87942019
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Entry
87942019 CDS
T10409
Symbol
CDEST_05516
Name
(RefSeq) Putative transcription initiation factor IIF, alpha subunit
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
cdet Colletotrichum destructivum
Pathway
cdet03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
87942019 (CDEST_05516)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdet03021
]
87942019 (CDEST_05516)
Transcription machinery [BR:
cdet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
87942019 (CDEST_05516)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
87942019
NCBI-ProteinID:
XP_062777726
UniProt:
A0AAX4IAQ6
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All DBs
Position
3:complement(join(4650021..4650280,4650341..4650815,4650867..4652282))
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AA seq
716 aa
AA seq
DB search
MSAPPPSGLPNGQNPNGQQSAQAGQPGQPRPPPIKRRPRGDPLVARKRPGAPRPAASRPP
PGGLQTASGARPSPGASGHHGLQRPETEEDIKARRAANGGWLDPAPQNMREFKIVTTKKA
LRDGVRHHVMKLSSAKADLEKRGIDPTNQEEFTRPVTLQRRDPRQPPPGREVKQEQVEPQ
PVDEKEAERLAQLKAEREAVRAVELAKSAPSLKDPNADKKAKPKEKEKDVQFHRQPRSEK
EKKQQELRYEEALPWHLEDADGKNVWVGSYVAPLSETTICFVATRDGKFAAVPLEKWYKF
TAKPHFNTMRLEEAEALMSKKTDVGRWYMRDKQKKSEQEEWEATRHALYGPARIKTESST
FRAASREEKLDHDQIDMEGDEFQDDDENPGLEQDNDEEYKEANDRIRRDQLGANLFGEAD
ERRVEKELNELKKAEEERRKEGKKTQKALIKREKETIYQSDSSGYDPFESSSSEDDSDEE
KQKEENKDKEKDEENKDKDKDADPKDKTASGVSSKGNTTPSGRQKHTDALKKGKSLKRPG
SPNLSESSGNESSRKKLKKHAATSVHQSRSSTPSAGLKSNLGKGAMSDGEATGGEMSDGQ
LRKKKIKLVGTGSRGTPVGSRAGSPMPATSGSKPGSPLPEGSPAPRAGSPNGPIEAWEIV
DALPELPGGISIGNLMRRFQGRIGDGPGQMDRKEWIKLVKENCAYGPDKILRRKPT
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcctccgccgtccggcctacccaacggccagaacccgaatggtcagcaatcc
gcgcaggctggtcagcctggacagcctcgaccccctccgattaaacgacgacctcgcggc
gatcctctcgttgcccgtaaacgaccaggagctccgcgaccggccgcttcgcgacccccg
ccgggagggttgcagaccgcatcaggtgctcggccgtcgcctggcgcatcaggtcatcat
ggtctacagcggcccgaaaccgaagaagatattaaggccaggagagccgcaaatggcggt
tggctggatcctgcccctcagaatatgagagagttcaaaatcgtgacgacaaagaaggcg
ttgagagacggcgttcgccaccacgtcatgaaactttcctctgccaaagcagatctcgaa
aagaggggtatcgaccctacaaaccaagaggaattcactcgacccgtcactcttcaacga
cgcgatccacgacaaccccctccgggccgcgaagtgaagcaggaacaagtcgagccgcag
ccagtcgacgagaaggaggcggaacgactggcacagctaaaggccgagcgtgaggccgtt
cgtgctgtggagcttgcgaagagcgcgccgagcctcaaagaccccaatgccgacaaaaag
gcaaagccgaaggaaaaggagaaagatgtccagttccaccgacagcccaggtctgaaaaa
gagaagaagcaacaggagctgcgatatgaggaggcgcttccttggcacctggaggatgct
gatggtaagaacgtctgggtcggatcctacgttgctcccttgtcggagaccacaatctgt
ttcgttgctactagagatggcaagtttgctgccgttcccctggagaaatggtacaagttc
accgccaagccccatttcaacaccatgaggcttgaagaagccgaggctctgatgagcaag
aagacggatgtcggccggtggtacatgcgagacaagcaaaaaaagagcgagcaggaagaa
tgggaggccaccaggcatgcgctctatggccccgcaagaatcaagacggagagcagtacc
ttcagggccgcttctcgggaagagaagttggatcatgaccagatcgacatggagggcgac
gagttccaagatgatgatgaaaatcccggattggagcaggacaacgatgaggaatacaag
gaagcaaacgaccgcattcgtcgcgatcagcttggcgccaacctgttcggcgaggccgat
gaacgtagagtcgagaaagaactgaacgagttaaagaaggcggaagaggagcgccgcaag
gagggcaaaaagacccaaaaagccctcatcaagagagaaaaggagaccatttaccagtcc
gattcgagcggctatgatcctttcgagtcctcatctagcgaagatgattccgatgaagag
aagcagaaggaagagaacaaagacaaggagaaggacgaggagaacaaggacaaagacaag
gatgccgaccccaaggacaaaacagcatccggcgtctcttccaagggcaacacgactccg
tctggccgacagaagcacacagatgctctgaagaagggcaagtctttgaagcgtcctgga
tctcccaacttatccgaatcgagtggcaacgagtcgtcgcgaaagaagctgaagaagcat
gccgcgacttcagtccaccagagccgctcgtcgacgccttcggctggcctgaagagcaac
ttgggcaagggggccatgagcgatggagaagccacaggaggagagatgtcagacggccag
ctcagaaagaagaagatcaagctcgttggcactggatcaagaggcacgcctgtgggttcg
agggctggcagtccgatgcccgccacctctggttctaaacccggctcgcctcttccagaa
ggttccccggctccgcgtgccggatcgcccaacggtcctatcgaggcttgggagattgtg
gacgctctgcctgagctgcctggtggcattagcatcggcaatctcatgaggaggtttcaa
ggccgtattggtgacggccctggtcaaatggatcgcaaagagtggatcaagctcgtcaaa
gaaaattgtgcttatggtcctgacaagattctgagacgcaagccaacctaa
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