Colletotrichum destructivum: 87942819
Help
Entry
87942819 CDS
T10409
Symbol
CDEST_06316
Name
(RefSeq) Putative RNA recognition motif domain, CID domain, RNA-binding domain superfamily
KO
K15560
protein NRD1
Organism
cdet Colletotrichum destructivum
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdet03021
]
87942819 (CDEST_06316)
Transcription machinery [BR:
cdet03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
87942819 (CDEST_06316)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrd1-Seb1_dom2
CID
RRM_1
RRM_3
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
87942819
NCBI-ProteinID:
XP_062778526
UniProt:
A0AAX4IDI0
LinkDB
All DBs
Position
4:join(1308975..1309100,1309179..1309424,1309683..1309791,1309883..1311134,1311192..1311378,1311429..1311875)
Genome browser
AA seq
788 aa
AA seq
DB search
MATAAPVVELEAALKAISDYKAPGVTGTRIAAMTSICVQNVQYESVLIQKLFTYLKMATP
PYKLGILYVVDSVIRKWREQALFHKQTTDENAADGTYGAGVYRLTTLMPSLINDVLRILP
DGYQDKLNKLLEIWHKGGTFPPEMIESFQYKLDITLVPAPVLSYTPEGSPPPDLVERMGY
NRPVAAPSAPAQMSAPDATNILAKLQKLAKASQEQSLNSIQNQTHGRPHDGGHNQTYGQP
QHEGQNRHNSQGHDNGQPHNLAQPQIPVQAQSNSQVPSPLQELLSKISTFGQSQPQPQPQ
PQPSVPSMNSQQSSYSMAPLSGGISAALAPAPAPLPFPQLQPQPGGMQFPGLPQMSQMPQ
LPQIPQWPQMPQMPQMPQIPQTTQSLAGVPPTAVDQMTMFQTLLNQGISAEHLAAMIAAV
NGGQSGAAPVAPPVSVAPTVTAAQNYYTSGQGYGGSAQLYGNSDQHRYNDRARSPDRLQG
RSRSRSPGRHWDQRGSSRDPRENGADYGRRSPDRGRHNSRDSRRGSDYRQRSPPPSRDGG
RSNSSRHGSSDKWIDYDQSLPEGHIKVLSRTLFVGGLNGMPERQIRDIFSRYGQVQTVII
NKEGRHAFVKMTNRPDAARAKAAMEKLAEQRRRGGTPPLRVRWGVGYGPRDACNYGKGVS
VILIDVLTDADRKWMFTAEYGGTGGKPLTSGMVVEEPDIEIGAGVSSKAISKHMKTDKSG
NNGPRSTRSGRDASRDDPGHWQSGRKDAKVSGANAQPLPQQFPFGIGTLPNGMPAYPPGF
AFPASKGN
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggctactgctgcccctgtcgtggagcttgaagccgctctcaaggcaatctcagactac
aaggctcctggcgttacaggcactcgcattgctgctatgaccagcatctgtgttcaaaat
gttcagtatgagtcggtcctcattcagaagttgttcacctacctcaagatggcaacccct
ccctacaagcttggcattctttatgttgtcgactcggtgatccgcaagtggcgtgaacag
gctctgttccataagcagacaaccgacgagaacgctgcagatggcacttatggtgctggc
gtgtaccgactgactacgcttatgcctagcctcatcaatgatgtgcttcgaattttgcct
gatggctaccaggacaaactgaataagttgctggagatttggcacaagggcggcactttc
ccacctgagatgatagagtcattccagtacaagctggatattacgcttgttcctgctcca
gtcctgtcctacacgccggagggtagcccccctccagacctggtcgagcggatgggctac
aacagaccagtggctgcgccctctgcccctgcccagatgtctgcgccagacgccaccaat
atcctggccaaactacagaagctcgcgaaagcctcgcaagagcagagtctgaacagcatc
cagaatcagactcatggacggcctcatgatggcggccacaaccagacttatgggcagcct
cagcatgaaggtcagaatcgccacaacagccagggtcatgataacggccaaccccataat
cttgcccagccccagattcctgtccaggcccagagcaactcgcaggtcccgtctcctctg
caggagctgctctccaaaatctcgactttcggccagtcgcagccgcagccgcagccgcag
ccgcagccgtcggtcccttccatgaactctcagcagtcctcttactccatggctcccttg
tctggcggcatctctgctgcgctagctccggctccggctccactgcccttcccccagctc
cagcctcagcctggtggcatgcagtttccgggccttcctcagatgtctcaaatgcctcag
ttgccgcagatccctcaatggccgcagatgccgcagatgccgcagatgccgcagattccc
cagactacccagtccctcgctggtgtccctcccaccgcagtcgatcaaatgacgatgttt
cagacgcttctcaaccagggtatcagcgctgaacacttggccgctatgatcgccgcggtc
aacggcggtcagagcggtgctgctcccgttgcgcctcctgtttctgtggccccaaccgtg
actgctgcgcagaactactacacctcgggacagggatatggcggctctgctcagctctac
ggcaactctgaccagcatcggtacaatgaccgcgcgcgatccccggaccgactccagggt
cgctctcgttcgagatcgcccggccgccactgggaccagcgcggatcttcgcgagacccc
cgtgagaatggcgctgattatggtcgtcgctctcccgaccgaggccgtcacaatagtaga
gacagccgccgaggcagcgactaccgtcaacgtagtccgcctccgagccgcgatggcggc
cgcagcaacagttctcgtcacggttcgagcgataagtggatcgactatgatcaatctctc
cctgagggccatatcaaggttcttagcagaaccctcttcgtcggaggtctcaatggtatg
ccagagcgtcagattcgcgatatcttcagccgttacggccaagttcagacggtcatcatt
aacaaagagggacgtcatgccttcgtgaagatgacaaaccgccccgacgctgcccgtgcc
aaggcggccatggagaaactggctgaacagcgaagacgtggtggtaccccgccgctccga
gtcagatggggcgtgggctatggtcctcgtgatgcttgcaactatggcaaaggcgtcagt
gtcatcctgatcgatgtgctcaccgacgcagaccgcaagtggatgttcaccgctgagtat
ggcggcactggcggcaagcccctcacgtcgggcatggtggtcgaggagcctgacatcgag
attggcgctggcgtatcttccaaggccatcagcaagcacatgaagacggacaagagcggt
aacaacggtcctcgttctacccgtagcggacgcgatgccagccgtgatgaccctggccac
tggcaaagtggccgcaaagatgccaaagtctctggagccaacgcccagccgcttccccag
cagttcccatttggtatcggtaccttgcccaacggcatgcctgcgtaccctcctggcttc
gcgttccccgcctccaagggcaactaa
DBGET
integrated database retrieval system
