Colletotrichum destructivum: 87942821
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Entry
87942821 CDS
T10409
Symbol
CDEST_06318
Name
(RefSeq) Putative RNA polymerase I-specific transcription initiation factor RRN6
KO
K15218
RNA polymerase I-specific transcription initiation factor RRN6
Organism
cdet Colletotrichum destructivum
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdet03021
]
87942821 (CDEST_06318)
Transcription machinery [BR:
cdet03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
87942821 (CDEST_06318)
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Gene cluster
GFIT
Motif
Pfam:
Rrn6_beta-prop
Rrn6_HB
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
87942821
NCBI-ProteinID:
XP_062778528
UniProt:
A0AAX4ID76
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Position
4:complement(join(1314730..1315924,1315978..1317991,1318041..1318161))
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AA seq
1109 aa
AA seq
DB search
MADEREETGRLYGPPRITVVPHEGLQDGPPLLHTSRVPGQAQALRIVQPPESLFPASRSA
EIVPSSTVWDSQRVQQRWLFNAHPEAFIGGSEAASFLAEDLTRLMRPEATPTTQPLLAIT
QMADVTNHTRVAPVPVVAMAAGESGELLRLSKIDEIDWRWGENENPALQIFSIDQHDREE
SVLWSHDGAPILQIKAALSLVRFEPTRWLLVQKRTSTTILQPEYHKVPVSERPPGIDKAI
ERPSRINPKPVLTITSEQTGGFAHSDVSFSYGSQKKPPQLAIVDECGYYSVWDVKGRDMV
GSASMRPKLRHCGHIQLGVTEQLPDEDSPAFRPEPHGVLWIGAAGPGVDLWDVPTVQDPD
TGNDLAALTARSKKLLLWNRTKFEVVDIKNPSFRESLSILRPNEPDRILDVKSNPLNQSQ
LFILTSSNIFWIETSSQGGATAKSDSLAVLQSFSHLRGSDADTLRLTVHHGGHGSGNETC
ALYLYSEKSPEVGVYWLSIPEETGLPQFEHHIVRLSDNPPKLQTVWPAPAFLHTTSSAAP
KGPGANYMDQQVQFQQLFVLGRDLSLSRSLLAISAVPALEVVPPDNSREWSRDGRRQVHN
KRRKQFLQHFEDTFIVPDGLGDMDELVQCRANRYQELMKIEQEKNSQQIQQRWPRSQNLD
FFMSRITVSIESVIMASEHATIEGPLSIFEAIEEAAANCLETDGGYIPLHTLHEYEPSFE
APPISHEAVAAWDSRFQELLGSQTKRIVAQPIINQYLCRGDRPAPLADIRDQLLELWGPA
GLPEGARQSRNVILAETAEAIARSLFGVAILDANLPTEESEPPTWVPEPPPQPIIQQPSQ
RSSQRFSLSPAKRNQLSSSQRLSLSPTKLSQPFSQRISLSPTKRGQAFGQRLSFSPSKGA
RSQSPYAPSSSIPFPFPSSGTFSQSLDASQADTPPTGAPSPSAALQRLSMLAEDLDVTNP
PTRQHSVLAYWPTARGASADDYVSSVLASSTKHIDVINERRQRAESRRRKRRSQLLGSSA
AATSSQTYGTQDEWEDSGPGTGPESVPPPATQPLPKLAPPVIGSSQVPPVVPSSQVIFSS
QVPQVLSQPVSGRHAMRSPGKKKKRKSGF
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaacgcgaagagaccggccgcttgtacggccctccgagaattaccgtcgtg
cctcatgaaggtctccaggatggaccgccgctgctgcacacgagccgtgttccgggtcaa
gctcaagcccttcgcatcgttcagcctccggaatcactctttcccgcctcgaggtccgca
gaaatagtaccttcctccacggtttgggattctcagcgagtgcagcaacgatggctgttt
aacgcccacccggaggccttcataggcggctccgaagccgcaagcttcctggccgaagat
ctcaccaggctcatgcgccccgaagccacgcccacgactcaaccattgctggccatcact
cagatggcggatgtcaccaaccacacccgggtcgcgccggtccccgtggtggccatggct
gccggcgagtcgggcgagctcctgcgcttatccaaaatcgacgagatcgactggcgttgg
ggtgagaacgagaacccggcgcttcaaatctttagcattgatcaacacgaccgggaggaa
tcggtgctgtggtcacacgatggtgctccaattctgcagatcaaggccgcgctgagctta
gtacgattcgagccgacgagatggttgctggtacagaaacgaacttcgaccacgatcctc
cagcccgagtaccacaaggtaccagtttctgaacgcccgcctgggatcgacaaggccatc
gaacgcccgtctcggatcaacccaaagcccgtactcaccatcacctcggagcagactggc
ggcttcgctcactctgatgtatctttcagctacgggtctcagaaaaagccaccccaactg
gccatcgtagatgagtgcggctactacagcgtctgggatgtcaagggtcgagatatggtg
ggatccgccagcatgcgacccaaactccggcattgcggccacatccagctaggcgttacg
gagcagcttcctgacgaagactcgccggctttccgcccggagccccacggcgtgctgtgg
attggcgcggcaggtcctggggtcgatttatgggatgtgccgactgttcaagaccctgat
acaggcaacgacctagctgctctgacggcacggtcaaagaagctcttgctgtggaaccgc
acgaaatttgaggtcgtcgatatcaagaacccgtctttccgtgagagtttatcgattctc
agacccaacgaaccagatcgcattctcgacgtgaagtcgaacccactgaaccaaagccag
ttgttcatactcacgagctcaaatattttctggatcgagacatcctcccagggaggagcc
actgctaaatccgacagtcttgccgtcctccaatctttttcacatcttcggggctcggac
gcagacactttaaggctgaccgtacatcatggtggccatgggtcgggcaatgagacgtgt
gcactgtacctctactcagagaagtcgccagaggtcggagtatactggctctccatccct
gaggaaacaggactgccgcagttcgaacatcacatagtaaggctcagtgacaacccacca
aagctacaaactgtatggcctgcaccagcattcctgcacaccacctcgtccgcagccccc
aaggggccaggggcaaactacatggatcaacaggtccagtttcaacaactcttcgttctc
ggcagagacctgagcctgagccgaagcctccttgccatctcggcagtcccagccctcgaa
gtcgtccctccagacaacagtcgcgaatggtcgagagatggacggagacaggtacacaac
aagaggcgaaagcagtttctgcagcactttgaggacacctttattgtacctgacggactg
ggcgacatggacgagttggtacagtgtcgtgccaaccgataccaggagctcatgaagatc
gaacaagaaaaaaactctcagcaaatacagcaacgatggccaaggagccaaaacctcgat
ttcttcatgtcgcggatcacggtttccatcgaatccgtcatcatggcatcggagcacgct
actatcgaggggccgttgtctatctttgaggccattgaagaggcggccgccaactgtctg
gagactgatggcggctacattccgttgcacaccttacacgagtacgaaccctcatttgaa
gcacctcccatcagccacgaggctgttgccgcatgggactcgcgttttcaggaactactc
ggctcccaaaccaaacgtatcgtcgctcaacccatcatcaaccagtatctctgccgcggg
gataggccagctccgttggcggatatccgtgaccaacttttggagctttggggtccagca
ggcctcccagagggagcacgacaatctcgcaatgtcatcctggccgagacggccgaggcc
atcgcccgctccctctttggcgttgcgatccttgacgcgaatcttcccaccgaggaaagt
gagcctcctacctgggttcctgaaccgccccctcaaccaataattcagcagccgagccag
cgatcgagccagcgcttctcgctgtctccggctaagcgaaaccagttgtcatcgagccaa
cgactctcactttcgccaaccaagctgagccagccgttcagccaacgaatctcactctcg
cccaccaaacgcggccaggctttcgggcagcgactctccttctcgccctccaaaggcgcc
cggtcccaatctccctacgccccctcctcctcgattccctttcccttcccctcctcgggc
actttttctcaatccctggatgcctctcaggccgatacgccgccaactggcgccccatca
ccgtccgccgcgctccaacgcctcagcatgctcgccgaagacctcgacgtcacgaacccg
cccacccgccagcactcggtgctcgcgtattggcccaccgcccgcggcgccagcgccgac
gactacgtctcctccgtcctcgcctcctcgacgaagcacatcgacgtcatcaatgagcgc
cgccagcgtgccgagtcccgccgccgcaagcgcagatcgcagctcctcggatcctctgcc
gcggccacctcctcgcagacgtacgggacgcaggacgagtgggaggattcggggccaggg
acgggccccgagagcgtaccaccgccggcgacgcagccgctgcctaagctggccccgccc
gtcatcggatcgagccaggtgccgccggtggtgccgtcgtcgcaggtcatcttctcgtcg
caggtgccacaggtcctatcgcagcccgtgtctggccggcacgcgatgcggtcaccagga
aagaagaagaagagaaagtctggcttttga
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