Colletotrichum destructivum: 87942857
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Entry
87942857 CDS
T10409
Symbol
CDEST_06354
Name
(RefSeq) Putative histone deacetylase family, Arb2 domain, Ureohydrolase domain superfamily
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cdet Colletotrichum destructivum
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cdet01009
]
87942857 (CDEST_06354)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdet03019
]
87942857 (CDEST_06354)
04131 Membrane trafficking [BR:
cdet04131
]
87942857 (CDEST_06354)
03036 Chromosome and associated proteins [BR:
cdet03036
]
87942857 (CDEST_06354)
Enzymes [BR:
cdet01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
87942857 (CDEST_06354)
Protein phosphatases and associated proteins [BR:
cdet01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
87942857 (CDEST_06354)
Messenger RNA biogenesis [BR:
cdet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
87942857 (CDEST_06354)
Membrane trafficking [BR:
cdet04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
87942857 (CDEST_06354)
Chromosome and associated proteins [BR:
cdet03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
87942857 (CDEST_06354)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arb2-like
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
87942857
NCBI-ProteinID:
XP_062778564
UniProt:
A0AAX4ID55
LinkDB
All DBs
Position
4:join(1437483..1439400,1439451..1439770)
Genome browser
AA seq
745 aa
AA seq
DB search
MEGGDQDVVMGGDDRPSNHTTTPNGVTTPAGGEPKNDNSTSPDDEDEDDFDDLDEDADQQ
VMNQLRRRGLLPTACCYDDRMKLHVNADFGTTPHHPEDPRRIEEIYKAFKRAGLVYTGPE
SKIADVMRDTPTKYMWRIGTREATKEEILTTHTPLHYHWVESLSKMNYTELRDTSRHYDQ
GRASLYVGSLTFTAALLSCGGAIDTCKHVVEGNVKNAFAIIRPPGHHAEYDQPLGFCFFN
NVPVAVKICQQEYPDDCRKVLILDWDVHHGNGIQNIFYDDPNVLYVSLHVYQNGIFYPGK
PDNQEIPDGGLEHCGTGPGLGKNINIGWHDQGMGDGEYMAAFQKIIMPVAKEFNPDLVVI
SAGFDAAAGDELGGCFVTPTCYAHMTHMLMSLADGKVAVCLEGGYNLQAISTSAVAVART
LMGEPPPKMEIPMLNKDAARVLAKVQSYQAPYWECMRPGIVPVPDIQDLNATRLHDHIRL
GQRQNLAQRHQMIPLFIQRDLLFKSYENQVLVTPDIPSARRILVIIHDPPALLAQPDVID
SHVESHNAWIVDSVAQYIDWAVEKGIAVMDVNVPSKVSRDEDMDPYSPRTADKDLLNELQ
ELANYLWDNYLQLYEDADDILLIGVGRSYSGVRALLTGRDCKARVAGVACFVEGMLRPVK
SDVDNELATWYKGHSQIYVSHDHPCWNSEDTLRRVTKRRFGTVIRSEANGVQKMMQTHAG
EVQKWMLEMLAIRQNGDTTEDDKMT
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcggcgaccaagacgttgtcatgggcggggacgataggccgtcaaatcacaca
accactcccaacggtgtgactacgcctgctggaggagagcccaaaaacgataactcgacg
tctcccgacgacgaagatgaggacgacttcgacgacttggacgaagacgcagaccagcag
gttatgaaccagctgcgcagacgaggtcttttgccgacagcatgttgttatgatgaccgc
atgaagcttcatgtcaatgccgacttcggcaccacacctcatcacccggaggatcctcgt
cggatagaggagatctacaaagccttcaaaagggccggtctggtctacaccggcccagag
agtaagattgccgacgttatgagagataccccaaccaagtacatgtggaggatcggcact
cgtgaggcaacgaaagaagagatccttaccacacacactccgctgcactaccactgggtt
gagagcctgtcaaagatgaactacaccgagttgcgcgacacgagtcggcattacgaccaa
ggccgtgcatcgctctacgttggcagtcttactttcactgccgccctcttatcctgcggt
ggtgccatcgacacctgcaagcatgtcgtggaaggcaacgtcaaaaatgcctttgctatc
atcagaccgcctggccaccacgccgagtacgaccagccgctcgggttctgcttcttcaac
aacgtgcccgtcgctgtcaagatctgtcagcaagagtacccggatgactgtcgaaaggtt
ctcatccttgactgggatgtccaccacggcaacggcatccagaacatattctacgacgac
cccaacgttctctacgtctccctccacgtttaccagaatgggatcttttatcctggcaag
cccgacaaccaagaaatacccgatggcggtctagagcactgcggtacagggcctggtctg
ggcaagaacatcaacattggatggcacgaccaaggcatgggagacggcgagtatatggct
gcttttcaaaagatcatcatgcccgtcgccaaagaattcaaccccgatctagtggttatc
tccgccggattcgacgctgctgccggagatgagctcggcgggtgcttcgtgacaccgacc
tgctacgcgcacatgacgcatatgctaatgtctctggcggacggcaaggttgctgtgtgc
ttggaaggtggctacaacttgcaggctatatcgacatccgccgtggctgttgctcgaacg
ttgatgggcgagccgccaccgaagatggagattcccatgctcaacaaggacgctgccaga
gttcttgccaaagtccagagctaccaggcgccctactgggagtgcatgagacccggcatt
gttccagtgcctgatatccaagatctcaacgcgaccagactccacgatcacatcaggcta
ggccaacggcagaacctcgcacaacgtcaccagatgattcctctcttcatccagcgggat
cttttgttcaaatcctacgagaatcaggtcctcgtaactcctgatattcccagtgcgcgt
cgtatccttgtcatcattcacgacccaccagcattgctcgcgcaaccggatgtgattgat
agtcatgttgaatcccacaacgcctggattgtcgatagtgttgcgcaatacattgactgg
gctgtcgaaaaagggattgcagtcatggacgtcaacgtgcccagcaaagtatcacgagat
gaggacatggacccctacagtccccgaacagcagataaggaccttctgaacgagctccaa
gagttggcgaactatctttgggacaactacctgcagctctatgaggacgccgacgatata
ctgctcatcggtgtgggtcggtcgtacagtggagtcagggcccttttgaccggtcgagat
tgcaaagcgcgtgttgccggagttgcctgcttcgttgaagggatgttaagaccagtgaag
tccgatgtcgataacgagctggcgacgtggtacaaggggcattcacagatttacgtatcg
catgatcacccatgctggaacagcgaggacacgctgcgcagagtgactaaacgacgattt
ggcacggtcatccgtagtgaggccaacggtgttcagaagatgatgcaaacgcatgctggg
gaggtccaaaaatggatgttggagatgctagcgattcgccagaacggagataccaccgaa
gacgacaagatgacttga
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