Colletotrichum destructivum: 87943073
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Entry
87943073 CDS
T10409
Symbol
CDEST_06570
Name
(RefSeq) Putative RNA recognition motif domain, splicing factor, RBM39, splicing factor RBM39, linker
KO
K13091
RNA-binding protein 23/39
Organism
cdet Colletotrichum destructivum
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdet03041
]
87943073 (CDEST_06570)
Spliceosome [BR:
cdet03041
]
Common components
Common spliceosomal components
General mRNP proteins
87943073 (CDEST_06570)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_10
RRM_occluded
RRM_7
NCBP3
RRM_3
Motif
Other DBs
NCBI-GeneID:
87943073
NCBI-ProteinID:
XP_062778780
UniProt:
A0AAX4IEL9
LinkDB
All DBs
Position
4:complement(join(2241116..2241374,2241435..2241899,2241955..2242263,2242326..2242990))
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AA seq
565 aa
AA seq
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MSGLDVEALLDATAKSSTETKTHDVDERPNGDRPERKERDRGRDGSRDRDYERRRRDRER
RDRSTTRSRRGTPDDVKASTPRSDAGSHKSRRRSRSRDDDRRHSRRHRGDGDYYRGGRAR
SRSRSPHRSYRSSRDDYRERRDRSDRYSGDHRRARDDDRPETSSKREATPQLTEDERDRR
TVFVQQLAARLRTRDLKAFFEKVGPVTEAQIVKDRISQRSKGVGYVEFKNEDSVTQALQL
TGQKLLGIPIIVQMTEAEKNRQVRTTETTSAHPNSIPFHRLYVGNIHFNVTEQDLQAVFE
PFGELEFVQLQKDDNGRSRGYGFVQYREASQAREALEKMNGFDLAGRPIRVGLGNDKFTP
ESTANILQRFPGQNPQFQGSAFSGAGGRGPQTSAFDRAGGRDSEKSGGASALDDTDVAGV
NFNNYSRDALMRKLARTDDASNGVDERQVLKPKTETKPLPVNVNMASRCVVLHNMFDPEE
EEGDEWVKELEDDVRQEAETKYGRVVHISVDPNSKGDIYLKFDKVQGGENAIRGLNGRYF
GGRMIDASPVVDAVYSSLFSRTRAI
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcctagacgtagaggcgttgcttgacgccaccgcgaaaagctcaaccgaaacc
aagacacacgatgtcgacgaacgtcctaatggcgaccgccccgagcgcaaggagcgtgat
cgcggccgcgatgggagccgtgacagagactacgagaggcgtcgccgagaccgcgagcgc
cgcgaccggagcacgacacgaagccgtcgcggaaccccggacgacgtcaaggcatccacc
cctcggagcgacgctggtagccacaagagtaggcggagaagcagaagccgcgatgatgac
cgccgtcactcacgtcgtcacagaggagatggtgattactacagaggcggacgagcccgc
tcccgctctcgctcgccccaccgctcttaccgctcatcccgcgatgactatcgcgaacgc
cgcgaccgctccgatcgctactctggggaccatcgccgggcaagggatgatgatcgtccc
gagacttcttccaagcgtgaggctacaccacaacttactgaagatgaacgggatcgccgc
actgtttttgtccagcagctcgccgcccgtcttcgcacacgcgacctgaaggcgtttttc
gaaaaggtcggccctgtcaccgaggcccagattgtcaaggatcgcatcagccaaagatcc
aagggagtcggttacgttgaattcaagaacgaggactctgtcacccaagcgcttcaactt
accgggcagaaattgttaggtatccctatcattgttcagatgacggaggccgaaaagaac
cgacaggttcgcaccaccgaaacaacaagcgcccaccccaactcgatccccttccaccgg
ctttatgttggcaacattcacttcaatgtcaccgagcaggatttgcaggccgtctttgaa
cccttcggcgagcttgagttcgtccagctccagaaagatgacaatggacgcagccgaggc
tatggcttcgtacaatatcgcgaagccagccaagccagggaggcccttgagaagatgaac
ggatttgatcttgccggtcgcccgattcgcgttggcctcggaaacgataagtttacccct
gagagcactgccaacatattgcagagatttcctggtcaaaacccacagtttcagggctct
gcattctctggcgcgggcggtcgcggcccccagacgtcggcattcgaccgtgccggtgga
cgagacagcgagaagtctggcggcgctagtgcactcgacgacaccgacgtcgcaggcgtc
aactttaacaactacagccgtgatgccctgatgagaaagcttgccaggactgatgatgct
tccaacggagtagatgagcgacaggtgctgaagcccaagaccgagaccaagccacttccc
gtcaacgtcaatatggccagccgatgcgttgtcctgcacaacatgttcgacccagaagag
gaagaaggcgacgaatgggtcaaggaattggaggatgacgtacggcaagaagccgaaacc
aagtacggccgtgtcgtccacatctcggtcgacccgaactccaagggcgatatttacctc
aagttcgacaaggtccagggcggcgagaacgccatcagaggtctcaacggccgctacttc
ggaggcaggatgatcgacgcgtcgcctgttgtagatgccgtctacagcagtttgttctct
cgcacacgagcgatctga
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