Colletotrichum destructivum: 87943140
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Entry
87943140 CDS
T10409
Symbol
CDEST_06637
Name
(RefSeq) Putative nucleoporin protein Ndc1-Nup
KO
K14315
nucleoporin NDC1
Organism
cdet Colletotrichum destructivum
Pathway
cdet03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
87943140 (CDEST_06637)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdet03019
]
87943140 (CDEST_06637)
Messenger RNA biogenesis [BR:
cdet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
87943140 (CDEST_06637)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Hexose_dehydrat
Motif
Other DBs
NCBI-GeneID:
87943140
NCBI-ProteinID:
XP_062778847
UniProt:
A0AAX4IFQ0
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All DBs
Position
4:complement(join(2459540..2460478,2460539..2461362,2461424..2461562))
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AA seq
633 aa
AA seq
DB search
MAPATVRRAPYKDFLQPALQRRFSSTATILLGLSYLQAVLLSGWTSYFWSWFPIGPAGFR
TLFLFTCGLSILVLRIAQYHVGARASNSTFHAFTKYFFSIHTLEAFLFYSFSSALFSHVY
LWSLPDSANLGWVTYYSGGNRTRVNERTLGFFTYMAVSAVAQAFFHFYHDSDRLIINVSR
PEGSDVKASGDASLNKVLGEVPAILIQSGVRCLSVAPIAAIVHMTVLRSFVWGWALFFLR
PFYNIPKSNMLPPTQPWDLPLIFRCVMAGLLINIVWKTANHAFSTFMVKPPLKNGKPLTS
ESKDPNGSLLNGLKSKKDQIRCFALWELAYIARNDEGRRKAIFQDIDRKDGSTWSHIFVH
CISVIKTIESRIDEYGKPAVVPAAPVQPEEVRARSSAPLKEDPIFQSKTVNRTMRGEVEK
ALTQVGRHPGNSPVSQLSPIAKKTLRGARDKVLSKEQQEALSSPQLKSQLQTWALKVISN
EYVGWMFRQQFRNRLTAVVLGTPYSELSQYVNATDVLSLLAVNSLVEDPFGRVHKDIPAI
VRTFTTVISKIEAFKAKFPIHWTDVEQDRATPEVDALITSLKTGLGQVIAEFEPYSSDLR
LTRTDIRLAKEAAALQDLPREDRTRLPEMQQTR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcaccggcaacagtcagaagggctccttataaggactttctgcagcctgcgctgcaa
aggcgattttcttccacagcgaccattcttctaggtctatcttatttgcaagccgtcttg
ctctccggctggacctcttatttctggtcttggtttcccattggccccgccggcttccga
acattattcctcttcacttgcggcctgtcgattctggtcttgcgtattgcgcagtaccac
gtcggtgcccgcgcctccaactcgaccttccacgcgttcacgaagtacttcttcagcata
cataccctcgaggcatttctcttctacagcttttcgagcgcgctgttcagccatgtctac
ctgtggtccctaccggacagcgcaaacttgggatgggtcacgtactacagtgggggcaac
cgcaccagggtgaacgagagaacgttgggcttcttcacctatatggctgtcagtgccgtg
gcccaggcgttcttccacttctaccacgacagcgaccggctcatcattaacgtgtcgaga
cccgaaggaagtgacgtcaaggcctcgggagatgcttcgctgaataaggtcttgggcgaa
gtgcctgctattcttattcagtctggggtacggtgcctcagcgtcgcccccatcgccgct
atagttcatatgacggttttgcgatcattcgtctggggatgggccttgtttttcttgcgg
cctttctacaacattcccaaatcaaacatgctaccgcccacccagccctgggacttgcca
ctgattttccgctgcgtcatggctgggcttttgatcaacattgtctggaagacggcgaac
catgctttttcgactttcatggtcaagcccccacttaagaatggcaagcctctcacgagc
gaatccaaggatccgaatggcagtcttctcaacggactcaagagcaagaaagaccaaatt
cggtgctttgccctctgggaactggcgtatatcgctcgtaatgacgaaggcagacgcaag
gccatcttccaggacatcgataggaaagatggatccacctggtcacatatcttcgttcac
tgcatcagtgtcatcaagacaatcgagagcaggatcgatgaatacggaaagcctgcggtc
gtgccagccgctcctgtccagcctgaggaagtgcgggctcggtcatcggcgcctttgaag
gaggacccgatcttccagagcaagacagtaaacagaacgatgcgtggcgaggtggagaag
gctctcacccaggttggacgccatcccggcaactcgccggtgtcacagctgagccccatc
gcgaagaagacgctccgaggagcccgtgacaaggttttgagcaaggagcagcaggaggca
ttgtcttcccctcaactgaagagccaactccagacgtgggctctgaaggttatcagtaac
gagtacgtcggttggatgttccgtcagcagttccgaaaccgccttaccgccgttgttctc
ggaacgccgtattcggagctgagtcagtatgtcaacgcgaccgacgtccttagcctgctg
gctgtcaacagtcttgtggaggatccgtttggcagggtccataaggacattcccgccatc
gtccggactttcaccactgtcatcagcaagatcgaggctttcaaggccaagtttcctatc
cattggaccgatgtcgaacaggacagagccacgccagaggtggatgctttgattacaagc
ttgaagacgggtctaggccaggtgattgcggagtttgaaccgtacagcagcgacttgagg
ttgactcgtacggatataagactggcgaaggaggccgcagccctacaagatctcccaaga
gaggacagaactcgacttcccgagatgcagcagacacgctag
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