Colletotrichum destructivum: 87943329
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Entry
87943329 CDS
T10409
Symbol
CDEST_06826
Name
(RefSeq) Putative BRCT domain, AAA+ ATPase domain, ATPase, AAA-type, core, replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
cdet Colletotrichum destructivum
Pathway
cdet03030
DNA replication
cdet03410
Base excision repair
cdet03420
Nucleotide excision repair
cdet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
87943329 (CDEST_06826)
03410 Base excision repair
87943329 (CDEST_06826)
03420 Nucleotide excision repair
87943329 (CDEST_06826)
03430 Mismatch repair
87943329 (CDEST_06826)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdet03032
]
87943329 (CDEST_06826)
03400 DNA repair and recombination proteins [BR:
cdet03400
]
87943329 (CDEST_06826)
DNA replication proteins [BR:
cdet03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
87943329 (CDEST_06826)
DNA repair and recombination proteins [BR:
cdet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
87943329 (CDEST_06826)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
nSTAND3
AAA_18
AAA_16
BRCT_2
AAA_28
RuvB_N
AAA_14
AAA_24
Hda_lid
Motif
Other DBs
NCBI-GeneID:
87943329
NCBI-ProteinID:
XP_062779036
UniProt:
A0AAX4IEW4
LinkDB
All DBs
Position
4:complement(join(2976828..2977152,2977202..2979811,2979866..2979904,2979959..2980104))
Genome browser
AA seq
1039 aa
AA seq
DB search
MPDIRSFFGPKGGAAPKPPAKKVEEPVKGRRNRKVVEDSDDDDEPVPAPKPAVKAADKKK
AKAEAINGTETTASDYFSKPAKASRSAAATKADQTTKVKNEVEVRTSPRNKKTTAKPAEP
VRNGSAATKKRGTTTYTKLESDDDADAYKDDGDEEDDDIFAADVKGRNKRKNDDYAEDGS
EDDLLPKPKRVASRSAVAATPTKSTRATAGAKRRKTPEDDEEESEEDQPPKKKAPAKPRA
PRAKKADEPEDSAYQSILNDIPTVRPPTPPAKDPDAKFDWRKNAGSGGNSSAVPPNAGAV
ELPEGEEECLSGLTFVFTGVLQTIGREEAQTLVKKYGGKVTGAPSSKTSYVVLGDDAGPS
KLKKIRDMKIKTINEEGLFELIRRLPAYGGSGKGAEKAREKKKKDEEAIKRQALEMEQEE
KARKAAAEKAAKQAAAARGTAAPTTPTAAPVQLWTSKYAPTQINHICGNKAQVEKIQAWL
ENWHKAKKYDFQRRGADGMGATRSIIISGPPGIGKTTSAHLAAKLAGFDVIESNASDTRS
KKLVENGVSDVMNNTSLLGFFAGDGKKVDGGKKNIVLIMDEVDGMSAGDRGGVGALAKFC
KKTEIPLILICNERKLPKMKPFDFVAMDVPFRRPTVEQVRSRIMTICHREGLKLPVQVID
ALIEGSNKDIRQIINMISTAKLDQASMDFDKGKAMSKAWEKHVILKPWDICQKMLGGGLF
APASKTTLNEKIELYFNDHEFSYLMIQENYLRTKPMALNNRGYNKREENLKYLELVDQAA
ESISDGDLVDRMIHGPQQQWSLMPTHAIFSTVRPSSFVAGQLMGSNFTSWLGNNSKTGKL
GRYVRELHSHMRLRSSGDANEIRQQYLPVLWDQTVRRLSVEGKDSVDEIIALMDSYYLTR
DDFDAIQELGVGPQAEGRADIESKTKAAFTRTYNAMSHPIPFMKASNIMEPKKAAKQAPD
LEEAIEEDDDVDVAEPAEPAEDDQLDLKGDKYIKQPKPKAKRATKKAKADDEDGDDAGVK
PKKGRPSGKATAAKGKGKK
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacattcggtccttttttgggccaaagggaggcgcagcccccaagcccccagcg
aagaaggttgaggagcctgtcaagggtcgaagaaacaggaaagtcgttgaggacagtgac
gacgacgatgaacctgtacctgcaccgaagccggcagtaaaggctgctgacaagaagaag
gccaaagccgaggctattaacggaaccgagactacagccagcgattacttttccaagcct
gctaaggcttcccgatctgcggccgctacaaaggcagaccaaaccaccaaagtgaaaaac
gaggttgaggttcggactagcccacgcaacaagaagacgactgcgaaaccggcagaaccc
gtccggaacgggagtgcggcgaccaagaagcgaggtaccacaacgtatacaaagctcgag
tcagacgatgacgccgatgcctacaaagatgatggtgacgaggaggacgacgacatattc
gctgccgatgtcaaaggccgaaacaagcggaagaacgacgactatgccgaggatgggagt
gaagacgatctgttaccaaagccgaaacgcgtggcttcccgaagtgctgtcgccgcgacc
ccaaccaagagcaccagagcgacggcgggtgcgaagagacgcaagacccccgaagacgat
gaagaggagtctgaggaggatcagccaccgaaaaagaaggcccctgccaagccacgagct
ccccgagccaagaaggcagatgaacccgaggattcggcgtaccaatcaatcctgaatgac
atccctaccgttcggccccccacacctccagccaaggatccggacgcaaagttcgactgg
aggaagaacgctggctctggcggaaatagcagtgcagtgcctccgaatgccggcgctgtc
gaattgcccgagggcgaggaggagtgtctttcgggactgacctttgtcttcactggtgtt
cttcaaaccatcggccgtgaggaggcccagacgctggtcaagaaatacggcggcaaagtc
accggagcgcccagcagcaagaccagttatgttgttcttggagacgacgcaggccccagt
aagttgaagaagatcagagacatgaaaatcaagaccatcaacgaggaaggcctgttcgaa
ctcattagacgactgcccgcctacggcggtagcggcaaaggtgcggaaaaggctcgagag
aagaagaagaaggacgaagaagccatcaagaggcaagctctggaaatggagcaagaagag
aaggccagaaaggccgcagcagagaaggcggccaagcaagcagcggctgcgcgcgggacc
gccgcaccaacgactccgaccgcggccccagtgcagctctggacctccaagtatgcacca
acccaaatcaaccacatttgtggcaacaaggcgcaggtcgagaaaattcaggcatggctc
gaaaattggcacaaggcaaagaagtacgatttccagaggcgtggggcggacggtatgggc
gccacgcgatccatcatcatctcaggcccccctggtatcggcaagacgacttcagcccac
ctggcggccaaactggctggattcgatgtcattgagagcaacgccagtgacacccgcagc
aagaagcttgtcgaaaatggtgtcagtgatgtcatgaataacacgtcgcttctcggcttc
ttcgccggagacggcaagaaggtcgatggaggaaagaaaaacatcgttctgatcatggat
gaagtcgatggaatgtcagcaggagatcgtggcggtgttggtgccctagccaaattctgc
aagaagaccgagatacccctcatcctcatctgcaatgagcgtaagctgccaaagatgaag
cctttcgactttgtggctatggatgttcccttccgacgaccaacggtagagcaggtccga
tcccgcatcatgaccatctgccaccgcgaagggctgaagctccctgtccaagtcattgat
gctctgatcgagggcagcaacaaggacatccgccagatcatcaacatgatctccaccgcc
aagctcgaccaagcatctatggatttcgacaaaggcaaggccatgtcgaaggcatgggag
aagcacgtcattctcaagccatgggacatctgccagaagatgctgggtggcggattgttc
gctccagcaagcaagactaccctgaacgaaaagatcgagctctatttcaacgaccacgag
ttcagttacctcatgatccaggagaattatctcaggacgaagccaatggcactcaacaac
agaggttacaataagcgggaagagaacctcaaatacctcgaacttgtggaccaggcggcc
gagagtatcagcgatggcgacctggtcgaccgtatgattcacgggcctcagcagcaatgg
agtctgatgcccacacacgcaatcttcagtacagttcggccctcaagcttcgtggctggc
cagctcatgggttccaacttcacttcctggctcggcaacaacagcaagactggcaagctc
ggccgatatgtccgtgagctgcattctcacatgagactccggtcttcaggtgatgccaac
gagatccgccagcaatacttgcctgtactatgggaccagacggtccgccgcttgtctgtc
gaaggcaaggattccgttgacgaaatcatcgcgttgatggatagctactatctgacacgg
gacgacttcgacgcgattcaagagcttggtgttggtcctcaagctgagggtcgcgctgac
attgagtcgaagacgaaggcggcattcactcgaacttacaacgccatgtctcatcccatt
cccttcatgaaggccagcaatattatggagccgaagaaggccgcgaagcaggctcccgac
cttgaggaagcgattgaagaagacgacgatgtcgatgttgctgagcctgctgagcctgct
gaagatgaccagctcgacttgaagggggacaagtacatcaagcaaccgaagcccaaggcc
aaaagagccactaagaaagccaaagcggatgacgaggatggtgacgatgcaggtgtcaag
cctaagaagggccggcccagtggcaaggcaacagctgctaaaggcaagggcaagaagtga
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integrated database retrieval system
