Colletotrichum destructivum: 87943331
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Entry
87943331 CDS
T10409
Symbol
CDEST_06828
Name
(RefSeq) Putative AAA+ ATPase domain, DNA polymerase III, clamp loader complex, gamma/delta/delta subunit
KO
K10756
replication factor C subunit 3/5
Organism
cdet Colletotrichum destructivum
Pathway
cdet03030
DNA replication
cdet03410
Base excision repair
cdet03420
Nucleotide excision repair
cdet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
87943331 (CDEST_06828)
03410 Base excision repair
87943331 (CDEST_06828)
03420 Nucleotide excision repair
87943331 (CDEST_06828)
03430 Mismatch repair
87943331 (CDEST_06828)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdet03032
]
87943331 (CDEST_06828)
03036 Chromosome and associated proteins [BR:
cdet03036
]
87943331 (CDEST_06828)
03400 DNA repair and recombination proteins [BR:
cdet03400
]
87943331 (CDEST_06828)
DNA replication proteins [BR:
cdet03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
87943331 (CDEST_06828)
DNA Replication Termination Factors
ELG1-RFC complex
87943331 (CDEST_06828)
Chromosome and associated proteins [BR:
cdet03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
87943331 (CDEST_06828)
DNA repair and recombination proteins [BR:
cdet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
87943331 (CDEST_06828)
Check point factors
HRAD17(Rad24)-RFC complex
87943331 (CDEST_06828)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA
AAA_16
Rad17
Rep_fac_C
AAA_24
ATPase_2
SLFN-g3_helicase
ABC_tran
nSTAND6
DUF7804
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
87943331
NCBI-ProteinID:
XP_062779038
UniProt:
A0AAX4IEP3
LinkDB
All DBs
Position
4:join(2981761..2981847,2981897..2982519,2982570..2982918)
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AA seq
352 aa
AA seq
DB search
MALIVDKHRPKSLEALSYHQDLSDRLSSLAQSGDFPHLLVYGPSGAGKKTRIVATLKELY
GPGVEKIKIDARVFQTSSNRKLEFNIVASNYHLEITPSDVGNYDRVVIQDLLKEVAQTQQ
VDQSAKQKFKVVVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTL
LVRVAAPTHEQICDVLAVSAKKENWPMVKGLHMRIAQESGRNLRRALLMYEAVHAQNEKV
TDTTPIPPPDWEALISQIAREIIDEHTPARILQVRAKLYDLLTHCIPATTILKTLTFKLI
PLIDDALKAEVIKWSAFYEHRIRMGTKVIFHLEAFVAKFMRIMEMYLMSMDL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcattgtcgacaaacacagaccgaagtcacttgaggctctgtcgtaccatcaa
gacctatcagataggcttagctctcttgcccaaagcggagatttcccccatctgctggtg
tacggcccgtctggcgctggcaagaagacgcgcattgtcgccactctaaaggagctatac
ggacccggcgtagagaagatcaagatcgatgctcgtgtcttccagacgtctagcaaccgc
aagctcgagttcaacattgtcgcgtcgaattaccacctcgagatcacaccatcggacgtc
ggaaactatgaccgagttgtcatccaggacctgctgaaagaggtggcacaaacacaacaa
gttgatcagtcggcaaagcagaagttcaaggtcgtggtcatcaatgaggccgaccacctc
acgagagacgcgcaggcggcgctgcgtcggacaatggagaagtactctccaaacttgcgg
ctgatcctcctcgccaactcgacggccaacattattgcccccatccgatcgagaacgctt
ctcgtcagagtggctgcaccaacacatgagcagatctgtgatgtcctggcagtgtcagca
aagaaagagaactggcccatggtcaagggcctgcacatgaggatagcgcaagagagcggc
aggaatctgcgacgagctttgctcatgtacgaggccgtccacgcacaaaacgagaaagtg
acggataccacaccgattcccccgccagactgggaagctctgatcagccagatcgcgagg
gagatcatcgacgagcacacccctgctcggattcttcaagtgcgagcaaagctttacgac
ctcctgacgcattgcataccggcgacgacgattctcaagaccctcactttcaagcttatc
ccgctgatagacgacgcactgaaggccgaagtgatcaagtggtcggcgttctacgaacac
cgaatcaggatgggcacaaaggtcatcttccatctggaagcattcgtggccaagttcatg
aggatcatggaaatgtacttgatgagcatggatttgtga
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