Colletotrichum destructivum: 87943373
Help
Entry
87943373 CDS
T10409
Symbol
CDEST_06870
Name
(RefSeq) Putative tRNA-splicing endonuclease, subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
cdet Colletotrichum destructivum
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdet03016
]
87943373 (CDEST_06870)
Transfer RNA biogenesis [BR:
cdet03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
87943373 (CDEST_06870)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
DUF4770
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
87943373
NCBI-ProteinID:
XP_062779080
UniProt:
A0AAX4IFG9
LinkDB
All DBs
Position
4:3109941..3111416
Genome browser
AA seq
491 aa
AA seq
DB search
MPLDDDDDNPTAAPAVQLQNDSGAGDEAEDEGLFDMRLFASMFNKKGVSSQAVRKGQKDF
ESHGTRAQENALETSRQVIEEVLSYSRVHRDTWSKGWYFPDYWPETLQAVEDGDTSGLAR
PEYLQEFLAETGPIYAKERVAVVEDMKGPQAKSMGRVIRGLKAPRPAVGKLWLLPEEALF
LVERGSLDLWWPFRELGEILPPPESKVAERTVHDAEQTKANSDEEADEGSDDEFDAGVPL
SLQAAYALFIGVDGERGKITLPKYQVYSHLRRLGYYVQRAPPDATNLVPQPQPAGKSLWQ
WLVSLLDRPAPTPQPYGPLVRPGVYRQYSLIYKQLELLVRYQPTAAAQEPVAPEGAYKVH
WHVWKPSKHPNLRVTDLPPPDIRIAVADARDDPVPSFEEVSALLDSTPYDPPDLNTMGGP
GRLYQRLRHGYRNVLIAVVDRGLVNFMRFGQAAFGEERLYERFDNRGGFRGGKRGGRGGR
GRGGRGRGRGR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcgacgacgacgacgacaaccccaccgcggcgccggccgttcagctccaaaac
gactcgggtgccggcgacgaggccgaggacgaagggctcttcgacatgcgcctgttcgcc
tccatgttcaacaagaagggcgtctcgagtcaggcggtgcgcaagggccagaaggacttc
gagtcgcacggcacccgcgcccaggagaacgcgctcgagacgagcaggcaggtcatcgag
gaggtgctctcatactcgcgcgtgcaccgcgacacctggagcaaagggtggtacttcccc
gactactggcccgagacgctgcaggccgtcgaagacggggacacgtctgggctcgcgagg
cccgagtatctgcaggagtttttggccgagacggggcccatctacgcaaaggagcgggtc
gccgtcgtcgaggacatgaagggaccacaggcgaagtcgatgggacgggtcattagaggg
ctcaaggcgccgaggccggcagtcggaaagctgtggctgttgcccgaggaggcgctgttc
ctcgtcgagagaggcagcctggatctctggtggccctttcgcgagcttggggagatcttg
ccgccgccggagagcaaggttgcggagagaaccgtacacgatgcggagcaaacaaaagca
aattccgacgaggaggcggacgagggctcagacgacgaattcgacgccggcgtgccccta
agtttacaggccgcatatgccctctttatcggcgtggacggcgagcggggcaagattacc
ctccccaaataccaagtctactcgcatctccgccggttaggatactacgtccagcgcgcg
ccgcctgatgccaccaatcttgtacctcagccccaacctgcagggaagtcattatggcag
tggctcgtttcactcctcgacagacccgcgcccacgccgcagccctacgggcccctcgtc
aggcccggcgtctaccgccaatacagcctcatttacaagcaactcgagctcctcgtacga
taccagcccacggccgctgcccaggaaccggtcgcgccggagggcgcgtacaaggttcac
tggcacgtgtggaagccatccaagcatccgaatctgcgcgtgacggacctaccgccgccg
gatattcgcatcgccgtcgccgacgcgcgggatgaccccgtgccgtcgttcgaggaggtg
tcggcgctgctggactcgacgccgtacgatccgcccgacctgaacacgatgggtgggccg
gggcgactgtaccagaggctcaggcacgggtaccgcaatgtgctgatcgcggttgtggac
cgcggcctggtgaacttcatgaggttcggccaggcggcgttcggggaggagaggctgtat
gagaggtttgacaaccgaggcgggttccgtggcgggaagaggggcgggaggggcggacgg
gggcgaggtggaaggggcaggggacgcggtcggtga
DBGET
integrated database retrieval system
