KEGG   Colletotrichum destructivum: 87943420
Entry
87943420          CDS       T10409                                 
Symbol
CDEST_06917
Name
(RefSeq) Putative sm-like protein Lsm6/SmF
  KO
K11098  small nuclear ribonucleoprotein F
Organism
cdet  Colletotrichum destructivum
Pathway
cdet03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cdet00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    87943420 (CDEST_06917)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdet03019]
    87943420 (CDEST_06917)
   03041 Spliceosome [BR:cdet03041]
    87943420 (CDEST_06917)
   03032 DNA replication proteins [BR:cdet03032]
    87943420 (CDEST_06917)
Messenger RNA biogenesis [BR:cdet03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     87943420 (CDEST_06917)
Spliceosome [BR:cdet03041]
 Complex A
  U1 snRNP components
   Sm proteins
    87943420 (CDEST_06917)
  U2 snRNP components
    87943420 (CDEST_06917)
 Complex B
  U1 snRNP components
    87943420 (CDEST_06917)
  U4/U6.U5 tri-snRNP components
    87943420 (CDEST_06917)
 Complex C
  U2 snRNP components
    87943420 (CDEST_06917)
DNA replication proteins [BR:cdet03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     87943420 (CDEST_06917)
SSDB
Motif
Pfam: LSM Parb-CE
Other DBs
NCBI-GeneID: 87943420
NCBI-ProteinID: XP_062779127
UniProt: A0AAX4IEQ9
LinkDB
Position
4:complement(join(3279363..3279429,3279505..3279660,3279780..3279817,3279893..3279898))
AA seq 88 aa
MSFVPINPRPMLQDLVNQDIVVRLKWGETEYKGKLVSIDSYMNIQLSGAEEYIDQKLTGA
LGQVLIRCNNVLWIRGAKQGENDVKMEG
NT seq 267 nt   +upstreamnt  +downstreamnt
atgagcttcgtgcccattaacccgcggcctatgctgcaagacctcgtcaaccaggacatc
gtcgttagactcaagtggggcgagaccgagtacaagggcaagctggtcagcattgacagc
tacatgaacatccaactcagcggcgccgaggagtacatcgaccagaagctgacgggagct
ctcggccaagtcctgatccggtgcaacaacgtcctctggatccgcggcgcgaaacagggc
gagaacgacgtcaagatggagggttga

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