Colletotrichum destructivum: 87944241
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Entry
87944241 CDS
T10409
Symbol
CDEST_07738
Name
(RefSeq) Putative nucleoporin Nup54/Nup57/Nup44, nucleoporin Nup54, alpha-helical domain-containing protein
KO
K14308
nuclear pore complex protein Nup54
Organism
cdet Colletotrichum destructivum
Pathway
cdet03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
87944241 (CDEST_07738)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdet03019
]
87944241 (CDEST_07738)
Messenger RNA biogenesis [BR:
cdet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
87944241 (CDEST_07738)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_57_C
Adhesin_P1_N
Rx_N
DivIVA
YliH
CDT1_C
Motif
Other DBs
NCBI-GeneID:
87944241
NCBI-ProteinID:
XP_062779948
UniProt:
A0AAX4IHI0
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Position
5:join(485229..485568,485632..486278,486347..486448)
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AA seq
362 aa
AA seq
DB search
MSLFGAPKPAGQTGGLFGGGGFGSTLGQSTQQQQQPQQQQQGSQQQGGLSLFGQTQNQSN
AFGNSFAQSQQPQQQQQQQQQQQQQQQQQQMPSLSQSQAQLSSSLWQPGRDTPQSQKPIP
EQMALIFEKWNPTNPNCAFKHYFYNKVDEASVPFYKPGPHEDPKEWEEALQKKPAPGYIP
VLCTGFSGVAARLQTQKKVVGELNVRLHQINASLDAILSRHDLETSVRALAARRRHVVLR
ERCLALAARVQVLRNRGYALSGDEDDLRLKLVELERNVQDPALAAREEELWSRLIVLRDY
ADQLMKETSKPAFASGEGLSEETEHKTKKVLEDYEKQIQHLKKEVESITKAFADWEKERN
PS
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgagtttattcggagcaccgaagcccgcagggcagactgggggcctcttcggcggtggt
ggattcggcagcacgctgggacagtcgacacagcagcagcagcaaccgcagcaacagcag
cagggcagccagcagcaaggtggtctgagtttgtttgggcaaacgcagaaccagtcaaac
gcctttgggaactcttttgcccagtctcaacagccccaacagcaacaacaacagcagcaa
cagcaacagcagcagcagcagcagcagcagatgcctagcttgtcacagtcgcaagcacag
ctttcaagctccctatggcaacccggcagggacacaccgcagagccagaagccgataccc
gaacaaatggccctcatcttcgagaagtggaaccccacaaaccccaactgcgcctttaag
cactacttctacaacaaggtcgacgaggcgtcggtccccttttacaagccgggccctcac
gaagaccccaaggaatgggaggaggcgctgcagaagaagcccgcgccgggctacattcct
gtcctttgcacaggattctcgggcgttgcggcgcgcctccagacgcagaagaaggttgtc
ggggagcttaacgtgcgcctgcatcagatcaacgccagtctggacgcgattctctcgcgg
catgacctcgagacgagcgtgcgagcgctggcggcccgccggcgccacgtcgtgctccgc
gagcggtgcctcgccctcgccgcgcgtgtgcaggtgctgcgcaaccgtggctacgccctc
agcggcgacgaagacgacctgcggctcaagctggtggagctcgagcgcaacgtgcaggac
cccgcgctggcggcgagggaggaagagctctggagccggctcatcgtgctccgggactac
gccgaccaacttatgaaggagaccagtaagcccgcgttcgcgagcggcgaggggttaagc
gaggagacggaacacaagacgaagaaggtcctggaagactacgagaagcagattcagcac
cttaagaaggaggtcgagtcgatcacaaaagcctttgctgactgggagaaggagcggaac
ccgagttga
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integrated database retrieval system
