Colletotrichum destructivum: 87944500
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Entry
87944500 CDS
T10409
Symbol
CDEST_07997
Name
(RefSeq) Putative ribosomal protein uS5 domain 2-type superfamily
KO
K12586
exosome complex component RRP43
Organism
cdet Colletotrichum destructivum
Pathway
cdet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
87944500 (CDEST_07997)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdet03019
]
87944500 (CDEST_07997)
Messenger RNA biogenesis [BR:
cdet03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
87944500 (CDEST_07997)
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
87944500
NCBI-ProteinID:
XP_062780207
UniProt:
A0AAX4IHM0
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Position
5:complement(1302931..1303959)
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AA seq
342 aa
AA seq
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MATSKGLPRDTFAKLSPHPFLLANLQPPAPANAARSNGRAPDEARIPNVNTSSLTHANGS
AVVRTGDTTVICGVRAETILAADIPNFRPAANLDETKPGSELKDYDLLVPNIELATGCAP
QFLPGVPPTTLAQTLSTRVYSLLHSSKLVDPEDLRIWYTRPAESAEAEDDDDDDKMDGDA
EKSGEGEKAVMAYWVLYIDIFFISFDGNPFDVAWTAVLAALRDTTIPIARWDPDREMVIC
SRDEPKPLTLHGFPVACTAGVFAEKETADRPSAGKFWTLVDLDTLEENLCDEQITVVVDR
SGGDTKVLSISKHGGTVLQPQLIREFVGVAERRWEQVWKAMA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggctacctcaaagggtctcccacgcgacacgttcgcaaagctctcgcctcaccctttc
cttctcgcaaacctccagccgcccgctcccgccaacgccgcgagaagcaacggccgcgcc
cccgacgaagcccgcattcccaacgtcaacacctctagcctgacccacgccaatggcagc
gctgtcgtccgcacgggcgacacgaccgtcatctgcggcgtgcgcgccgagaccatcctc
gccgccgacatccccaacttccgccccgccgcgaacctcgacgagaccaagcccggctcg
gagctgaaagactacgacctgctcgtccccaacatcgagctcgccaccggctgcgcgcct
cagtttctgcccggcgtcccccccacgaccctcgcccagactcttagcacgagagtgtac
tcgttgctgcactcctccaagctcgtcgaccctgaggatctgagaatatggtacactcgc
cccgccgagagtgccgaggcggaggatgacgacgatgacgacaagatggacggtgacgcc
gagaagagcggcgagggcgagaaggccgtgatggcatactgggtcctctatatcgacatc
ttcttcatctcctttgacggcaaccctttcgacgtcgcctggaccgccgtcctcgccgcc
ctgcgtgacacaactatccccattgcccgctgggaccccgatcgcgagatggtgatctgc
tcgcgcgacgagcccaaacccttgacgctgcacggcttccccgtcgcctgcacagccggc
gtcttcgcagaaaaggagacagcggaccgtccctccgccggcaagttctggacgcttgtc
gacctcgacacgctggaggagaatctctgcgacgagcagatcacagtggtggtagaccgc
agcggaggagacaccaaggtgctgtcgatatcgaagcacgggggcacagtgctgcagccg
cagctcatacgggagttcgtgggcgttgcggagcggagatgggagcaggtttggaaggcc
atggcatga
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