Colletotrichum destructivum: 87944531
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Entry
87944531 CDS
T10409
Symbol
CDEST_08028
Name
(RefSeq) Putative pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
cdet Colletotrichum destructivum
Pathway
cdet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
87944531 (CDEST_08028)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdet03041
]
87944531 (CDEST_08028)
Spliceosome [BR:
cdet03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
87944531 (CDEST_08028)
Complex C
U4/U6.U5 tri-SnRNP related factors
87944531 (CDEST_08028)
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Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
87944531
NCBI-ProteinID:
XP_062780238
UniProt:
A0AAX4II31
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Position
5:complement(join(1457134..1458200,1458339..1458354))
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AA seq
360 aa
AA seq
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MRRGVELPSYRIASHRITLQPPHPTPPDRADPFPIAKSSTIEQQYCHPHRRFSRADRFIY
QASSRPSSPPPDPTSQEPTPKEAATMSKPDLVYADERRFLDERGSSASLAPNGENPATIM
EKAVRERIVDSYFYKEQCFAVNEADIVDRVVEHVTFVGGTYGVTQKPTPFLCLAFKLLQL
APSDDVLEAYLGLGGEKFKYLRALACFYVRMTRKARDVYLLLEPFLEDRRKLRRKGRQGT
SLTYMDDFVDDLLTKTRVCATSFRELPKRSDLVDLDELEERISPLGDIDELLEEEDEREA
KEREEADARDNGADDSEGEIVEDRSGDGEPMDVERRSRSRSGPRSQSRSRSRSRSRQRSP
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgcggcgtggagctgccgtcgtatcgcatcgcatcgcatcgcatcacattgcag
ccaccccaccccacaccacccgatagagccgatccatttccaatcgcaaagtcttcgacc
attgagcagcagtattgtcatccccaccgacgcttctcgcgcgcggaccgattcatctac
caagcgagctctcgaccatcctctcctccacctgatcctacatcccaagaaccaaccccg
aaagaagccgcaacgatgagcaagcccgacctcgtctacgccgacgaacggcgcttcctc
gatgagcgcggttcctcagcctcgcttgcgcctaatggcgagaaccccgccacgatcatg
gagaaggccgtacgcgaacgaatcgtcgactcgtatttttacaaggagcagtgcttcgca
gtcaacgaggccgacatcgtcgaccgcgtcgtcgagcacgtcacctttgtcggcggcacc
tacggcgtcacccagaagcctacgccgttcctgtgcctggccttcaagctgctgcagctc
gcgccctcggacgacgtgctcgaggcctacctcggcctcggcggcgagaagttcaagtac
ctgcgagcgctggcgtgcttctacgtccgcatgacgaggaaggctcgggatgtctacctc
ctgctcgagccattcctcgaggaccggaggaagctgaggcgcaagggccgccaggggacg
agcctgacgtacatggacgacttcgtcgacgacctgctgaccaagacgagggtctgcgcg
acgagcttcagggagctgcccaagaggtccgacctggtggacctggacgagctggaggag
agaatcagcccgttgggggacatcgacgagctgctggaggaggaggacgagagggaagcg
aaggagagagaggaggctgacgcgagagataacggcgcggacgattcggagggagagatt
gtcgaggacaggagcggcgacggcgagccgatggacgtggagaggcggtcaagatcgcgg
tcaggaccacggtcgcagtcgaggtcgcgttcgaggtcacgaagcagacaacggtcccct
tga
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