KEGG   Colletotrichum destructivum: 87944901
Entry
87944901          CDS       T10409                                 
Symbol
CDEST_08398
Name
(RefSeq) Putative tetratricopeptide-like helical domain superfamily, pre-mRNA-splicing factor Syf1
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
cdet  Colletotrichum destructivum
Pathway
cdet03040  Spliceosome
Brite
Messenger RNA biogenesis [BR:cdet03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     87944901 (CDEST_08398)
Spliceosome [BR:cdet03041]
 Complex B
  Other components
   Prp19-related factors
    87944901 (CDEST_08398)
 Complex C
    87944901 (CDEST_08398)
SSDB
Other DBs
NCBI-GeneID: 87944901
NCBI-ProteinID: XP_062780608
UniProt: A0AAX4IJB9
LinkDB
Position
5:complement(join(2840649..2842889,2842942..2843112,2843195..2843251))
AA seq 822 aa
MPASVLLNGSQRRPDLHLVGDEDSVYEQDVIRNPGSIKPWLAYIQFKSQHGTVHERAFVL
ERACLQLPRSYKLWKMYLTFRVQHVSKLNASVFSAEYRKVNALFERALILLNKMPRIWEL
YLKFLLQQPLVTTTRRTFDRALRALPLTQHNRIWALYKPFANSIAGISAVKVWRRYMQIH
PEDAEDFIELLTQAGFYTEAVKKYMDVLNNPRFASKQGKGHYELWSEMVDLMVEHAADIE
TGHETGIDVDRIVRSGIVRFADQRGKLWCGLATYWIRRGNFERARDVFEEAITTVMTVRD
FTLVFDSYTEFEESIIGALMEVASDRADKGIVDEEADFELDIRMMRFEQLMDRRPFLLND
VVLRQNPNNVSEWEKRVALWGDNKFEVVQTYTAAIATIQPKKAIGAFHQLWANYAKFYER
GGDVRNARVIMEKAVKVPFKSVAELADMWIEWAEMELRNENFDDAVRIMAKAVQAPKRST
VDYFDETLSPQQRVHKSWKLWSFYVDLVESVSSLEDTRKVYERIFELRIATPQTVVNYAN
LLEEHQYYEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRKIGIERLRDLFEQAIEDCP
PKFAKVIYLMYGNLEEERGLARHAMRIYERATRAVADEDRADMFNFYITKSASNFGLPST
RPIYEKAISTLPDNEARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTSPDFWAKWE
AFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQALARSQRRPEESIDPEAADAMAAL
ERQAKAPVGFVAASDTAKTTNEAEAPPVTANPDAIDIDDLDE
NT seq 2469 nt   +upstreamnt  +downstreamnt
atgcctgcctccgtgcttctcaacggctctcagagacgtccagacctgcacctggtgggc
gacgaagactccgtttacgagcaagacgtcatccgcaaccccggaagcatcaagccatgg
ctcgcctacatccagttcaagtcgcaacatgggaccgtacacgagcgcgccttcgtgctc
gaacgcgcctgtcttcagctcccccgatcatataagctttggaagatgtatcttactttt
cgagtccaacacgtttcgaagctgaacgccagcgtcttttctgccgaataccgcaaggtt
aacgcccttttcgagcgcgcgctgatccttttgaacaagatgcctcggatctgggaactg
tatctgaaattcctacttcaacagcctcttgttacgaccacacggcgaactttcgatcgg
gctcttcgcgcactgcctctcacccagcacaaccgaatctgggccctctacaagcccttc
gctaattccattgcaggaatcagtgccgtcaaggtgtggcgccgctacatgcagattcac
cccgaggacgccgaagacttcatagaacttctcacccaggcgggcttctacacagaggcc
gtcaagaaatacatggatgtcctcaacaatccgcgattcgcaagcaagcagggaaagggg
cattacgagctgtggagcgaaatggtcgacctgatggttgaacatgcggcggacatcgag
actggtcatgagactggcatcgatgtagacaggatcgttagaagcggtattgtccgtttt
gccgatcaacgagggaagctatggtgtgggctggccacatattggatacggaggggcaac
tttgagcgcgctagggatgtatttgaagaagctatcacgacggtgatgaccgtccgagac
ttcactcttgtttttgactcatatactgagttcgaggagtctatcattggagctctgatg
gaggtcgcctctgatcgcgcggacaagggcattgtcgacgaggaggcggatttcgaactc
gacatcagaatgatgcggttcgagcaactcatggaccggagaccttttcttctcaacgac
gtcgtcctgcgccagaaccccaacaatgtgtcggaatgggagaagagggttgccctttgg
ggcgacaacaagtttgaggtggttcagacgtatacggccgccatcgcaacaatacagcca
aagaaggccataggggcattccaccagctctgggcaaactatgccaaattctacgagcgc
gggggcgacgtacggaacgcgcgcgtcatcatggagaaagctgtcaaggttccgttcaag
tccgttgcggaattggctgacatgtggattgaatgggccgagatggagctgaggaacgaa
aactttgatgatgccgttcggatcatggcaaaggcggtgcaagcgccgaagagatcgaca
gtcgactattttgacgagacgttgtcgccacagcagcgtgtgcacaagagctggaagctc
tggagcttctacgtggacctcgtcgagagtgtcagctctctggaggatactcggaaggtg
tacgagcgcattttcgaactgcggattgctacgccgcaaacagtggtcaactacgccaat
ctgttggaggagcaccagtactacgaggagtcgttcaaaatctacgaacgaggcctggat
ctcttcagctacccggtcgcctttgagctatggaatctgtacctcacaaaggccgtcgat
cgcaagattggcatcgaacgtctgcgcgacctttttgagcaggctatcgaggactgtccg
cccaaatttgccaaggttatctacctcatgtatggcaacttagaggaggagcggggtctt
gcaaggcacgctatgcgaatctacgaacgcgcgaccagggcggtggcggatgaggaccgg
gcggacatgttcaatttttacatcaccaagtcggcatccaactttgggctgccgtcgacg
agacccatctacgaaaaggccatatccaccttacccgacaatgaggcacgggacatgtgc
ctaaagtttgccgacatggagaagcgccttggcgagatcgatcgggcgcgggctatctac
ggtcacgcgtcacagttttgcgacccacgcaccagtccagacttttgggcgaaatgggag
gcgttcgaggtgcagcacggcaacgaggacacgtttaaggaaatgctgcggatcaagcgg
agcgtgcaggcacagtacaacaccgacgtcaacttcatcgcgtcgcaggccctcgcacgc
agccaacggcgaccagaggagtcgatcgatcccgaggcggccgatgccatggcagcgctc
gagcgacaggcgaaggcgcccgttgggttcgtggcggccagcgataccgccaagacaacc
aacgaagccgaggcaccacctgtaacggcaaatccggatgccatcgacatcgatgaccta
gacgagtaa

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