Colletotrichum destructivum: 87945389
Help
Entry
87945389 CDS
T10409
Symbol
CDEST_08886
Name
(RefSeq) Putative HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
cdet Colletotrichum destructivum
Pathway
cdet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
87945389 (CDEST_08886)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdet03019
]
87945389 (CDEST_08886)
Messenger RNA biogenesis [BR:
cdet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
87945389 (CDEST_08886)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
HBS1_N
MMR_HSR1
GTP_EFTU_D2
GTP_EFTU_D3
GTP-eEF1A_C
Roc
Ras
Septin
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
87945389
NCBI-ProteinID:
XP_062781096
UniProt:
A0AAX4IKZ5
LinkDB
All DBs
Position
5:join(4435840..4436146,4436226..4436933,4436984..4437184,4437244..4438448)
Genome browser
AA seq
806 aa
AA seq
DB search
MSRHQAVRNLDYDEALDEYEGEDFDDENEADQLSPEDRDAMNVGTATVQSALGPDADKVT
AQQIQDALWYYYYDIDKTVSYLQKKFVAPPPAPKQEPKKAKDDGFGLESMGGEVTDYDIA
TVPAYPIRQTVSLSPSSFFHGIPWMNIPSNRQAVLVPPRPLPGGLLGGGEGPKLSKLQAL
AAARKKKAATEAKNPDDKVDRAEKRMSTLAIDESSKGGQRPGSSILAKRQKLAADSASGA
QAATLVSRPRQDEPAPGPSGMDVDDAPSPGNIDEAEVDCLVVPPTRPSAFAQTLFGSAQN
SAAASQTYTLPYMDSSTFVPSAFSQPSPDDIVLAAQAKAGTKFDAAAAKSATKKVVTKPT
GSQTPTGEMKQLQLDDSAAPKNKKLNVLKEFEKSENKRSASFVVVGHVDAGKSTLMGRLL
LELKYIEQHLIDRYRRQGEKTGKSSFALAWVMDQREEERERGVTIDIATNQFETEKTRFT
ILDAPGHRDFVPNMIAGASQADFAILVIDANTGAFEKGLKGQTREHALLLRSLGVQRVIV
AVNKLDMVGWSKDRFDEISEQVTGFMKGNGFQLKNVTFVPISGLTGANLAQRPDDEALSW
YDGPTLIEALEDSDPMARALEKPFRMSISEIYRTQQSQLTVAGRIESGTVQNGEALIIQP
SGEPASIRSIEVDGEVQDWAVAGQNVNIGLYGIDPIHVRVGDIISTKAAPIETSDTLTMK
VLAFDHLMPMPVDVHRGRLHAAGRVEAIPAVLDKLTGSTVKKNPKIVQPGKVARVVVKLE
SKVPLEAGQRVVLRSGGETIAAGLLE
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccaccaggcagttcgcaatctcgactacgatgaggccctcgacgagtacgaa
ggcgaagattttgatgatgagaacgaggccgatcagctcagccccgaggatcgcgatgcc
atgaatgttggaaccgcaacagtgcaaagcgcgctgggtcctgacgccgacaaagtgacg
gcgcagcaaattcaggatgcactgtggtactactactatgacattgataagacagtgtca
tatctgcagaagaaattcgttgcgccgcccccagccccaaagcaggagcctaaaaaggcc
aaggatgatggttttggtcttgagagcatgggtggtgaggtaacggactacgacatcgca
actgttccagcatatcccatacgacagacggtttccctttctccgtcttcatttttccat
ggcatcccttggatgaatatacccagcaaccgacaggctgtcctcgtcccgccccggcct
ctgcctggcggtctcctcggcggcggcgaaggtccaaagctttccaagttgcaggcattg
gctgcggcgcgaaagaagaaggcggcaacggaggcgaaaaatccagacgacaaggtcgac
cgagcggagaagagaatgtcaactttggctatcgatgagtcatcgaaggggggtcagaga
cccggctctagcatcctcgccaaacgacagaagctggcagcagactcggcctcgggagct
caagctgcgacgctcgtttcgcggccacgacaggacgaacctgcgccaggtccatctggt
atggatgttgatgatgcgccatctcctggaaatattgacgaagccgaggttgactgtttg
gtggtgcctccgacaagaccatctgcctttgctcagacactctttgggtctgctcagaat
tctgccgccgcctctcagacgtacactctgccgtacatggactcttccacctttgtgcct
agtgctttctcccagccgagccccgatgacatcgtgctcgcagctcaggcgaaagcgggc
actaagttcgacgctgctgccgccaagagcgccaccaagaaagttgtcaccaaaccgaca
ggctcccagacgcctactggtgagatgaaacagcttcagctagacgactcggcagctccc
aagaacaagaagctgaacgttctcaaggagtttgagaagagcgagaacaaaaggagtgcc
agctttgttgttgtcggccacgtcgatgctggaaagagtacgctgatgggcaggctactt
ctggaactgaagtatattgaacaacatcttatcgaccggtatcgaagacagggtgagaag
acgggaaagtcttcgtttgccctcgcatgggtgatggatcaacgagaggaagagcgcgag
cgaggtgtcaccattgacatcgccaccaaccagtttgaaaccgagaagacacgtttcaca
atcctcgacgccccaggccacagagacttcgtacccaatatgatcgccggagccagtcaa
gcagactttgcgattctcgtcatcgatgccaacacgggagctttcgagaagggtcttaag
ggtcagaccagagagcatgctctcctgctgagaagtctgggggtgcaaagagtcattgtt
gctgtcaacaagctggacatggtggggtggtcaaaggatcgattcgacgagatctcagag
caagtcactggattcatgaagggcaacgggttccagcttaagaacgtcacttttgtgccc
atatccgggcttactggtgccaacctggcgcagcggccggacgacgaggctctttcttgg
tacgatggcccaacactgatcgaggcgctggaagattcggatccgatggcgagagcactc
gagaagccattccggatgtctatttcggaaatctaccggacgcaacagagtcagcttact
gtggccgggcggatagaatctggcacggtgcaaaacggagaggcgttgattattcagcca
agtggagagccggcatcaatacgatcgatcgaagtggatggcgaggtgcaagactgggca
gtcgcagggcaaaatgtcaacattggcctgtacggcatcgacccgatccacgtgcgggtg
ggcgacatcattagcaccaaggcagcgcccatcgagacgagcgatacattgacgatgaag
gtactggcctttgaccacttgatgccgatgccagtagacgttcatcgcggtcgcctgcac
gccgcgggcagagtggaggccatcccagccgtgttggacaagttgacaggaagcacggtg
aagaagaaccccaagatcgtgcagccgggcaaggtcgcgcgggttgtcgttaagctggag
tccaaggtgccgttggaggcggggcagcgagtggtgctaagaagcggcggagagacaatt
gctgcagggctactggagtaa
DBGET
integrated database retrieval system
