Colletotrichum destructivum: 87945481
Help
Entry
87945481 CDS
T10409
Symbol
CDEST_08978
Name
(RefSeq) Putative DNA helicase, UvrD/REP type, DExx box DNA helicase domain superfamily
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cdet Colletotrichum destructivum
Pathway
cdet03420
Nucleotide excision repair
cdet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
87945481 (CDEST_08978)
03430 Mismatch repair
87945481 (CDEST_08978)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdet03400
]
87945481 (CDEST_08978)
Enzymes [BR:
cdet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
87945481 (CDEST_08978)
DNA repair and recombination proteins [BR:
cdet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
87945481 (CDEST_08978)
MMR (mismatch excision repair)
Other MMR factors
87945481 (CDEST_08978)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
ADDB_N
Motif
Other DBs
NCBI-GeneID:
87945481
NCBI-ProteinID:
XP_062781188
UniProt:
A0AAX4IM67
LinkDB
All DBs
Position
5:complement(4711722..4714691)
Genome browser
AA seq
989 aa
AA seq
DB search
MKSSSSAPGPAESILATLNTAQCRAVTSNASTVAILAGPGSGKTHTLTSRVVWLVDNVGY
APTDIIVATFTVKAAREMKERIAKALGDDRGKRVVLGTFHSIARRYLAAYGKHIGLDEKF
AIADDTDSRSIIQRICKRFQLSVDPAGARSWISKKKAKGENQTPAKRNGKEVPQSPDMET
CFREYQSHLERSNLLDYDDLLTRCVELLRKHPACVANVQAVLIDEYQDTNGIQYELMRLF
AQARERITIVGDPDQSIYGWRSAEIKNLYRLLKDYPNAEEISLEENYRSSQAILDVSLKV
IQQDKKRYQKVLLPIHNKGTRPVLRRLKSSAVEAEWIVSEIKRALLMAGKMLTHDDVAIL
LRSASLSRHIESALGKAGMAYRMVGGFKFYDRIEVKVILDYLRVIHQPDNNDAVARIINV
PRRGIGDTTIKALLEEAESSKLSVWALLNKHCRGERQAKTNIKKAMEQKVSGDLLRLVSG
VRRKIQEPPNGSPYYHLVDLIENLLSQLNFQAYLRDNYPEEHEARWANVQEFISLAGDFM
RDLSATADEDRLPQVDGVQQMQENDALGRFLANVSLASDAQQKGDTDNKPMVTISTIHAA
KGLEWPVVFVPAVYNGSIPHMRSEDPDEERRLLYVAMTRAQSLLYLSCPMYSSQNGGNGG
ERTELSKFIPSEIHPYFRKCGPSFEPGILQEIGRILRRESEVPSQDKVYKDMPLLERPED
NLYPEDPESSFGEAEAGGRSRQWQRRPRPQAVSASEEGDSQPVPTWHASTTMDGASNFTL
PGFTTASAAQAMLAAAKDMATSAQRSDQGPQGSAGPRRGTTKRPADQRSLLGFVKRSRSD
LSDTAGPVVNRSPAVQSRPALQELPELPNLYQAQRSAPTIEPGLGGHRLGAGKLPFKPGR
AAIGGVAGPKKHYANFSSSPPRPKSPEKENQSTDEPPAVRERPASCLHATTTTNGFGGFK
RPAALKKEGGIAPIDRLRKPFKPLTMNRP
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgtccagctcggccccagggccggccgaatctattctggcaacactcaatacc
gcgcagtgccgcgccgtcacctcgaatgcatctacggttgccattcttgccggtcctgga
agcggaaagacgcatactctgacttcccgcgtcgtctggctcgtggacaatgtcggctat
gcacccaccgacataattgtcgctacctttacggtcaaggccgcgcgggagatgaaggaa
cgcatcgccaaggccctgggcgatgaccgtgggaaacgggttgtcctcggcacattccac
agcatcgctcgtcggtatcttgccgcctacggaaaacacattggcctggacgagaaattc
gccatcgcagacgacacagattcgaggtccattatccagaggatttgtaagcgattccag
ctctcggttgatcctgcgggtgcaagatcatggatcagcaagaaaaaggcaaagggtgaa
aaccaaacgccggcaaaacgaaatggcaaggaggttccccaaagtcccgatatggaaacc
tgctttcgagagtatcagagccatctcgaacgctcgaacctgctggactacgacgacctg
ctgactcggtgtgtggagctgctgcggaagcatccggcatgtgtcgccaacgtccaggcc
gtgctcattgatgagtaccaagacaccaacggcattcagtacgagctcatgaggctgttc
gcgcaggccagagagaggatcaccatcgttggagacccagatcaaagcatttacggatgg
cgatccgccgagatcaagaatctgtacaggcttctcaaggactacccgaacgcagaggag
atctcgctcgaggaaaactaccgctcgtcccaagcaattctggacgtgtctctgaaggtc
atccagcaggacaagaaacggtaccaaaaggtgctgttgcccatccacaacaaaggcacc
agacccgttttgcggcggctcaagtcttcggctgtcgaggctgaatggatcgtgtcggag
atcaaaagggctctgttgatggcgggcaaaatgctcacccacgatgacgtggcaattctc
ctgcgatcggcttccctctcgaggcatatcgaatcggcccttggcaaggccggaatggct
tacagaatggtgggcgggtttaagttctacgatcgcattgaggtcaaggtgatccttgat
tatctgcgtgtcatacaccagccagacaacaacgatgcagtggctcgtatcatcaatgtg
cctcgccgcggcattggagacacgaccatcaaagcccttctcgaggaagccgaaagctcc
aaactgagcgtctgggcgttgctgaataagcattgccgaggagagcggcaggcgaagacc
aacatcaagaaagccatggaacagaaggtcagcggagacctgctaaggctggtgtcagga
gtcaggaggaaaatccaagagcctccgaacgggagcccctactaccacttggttgatctc
atcgaaaatctgctttcgcagctcaatttccaggcctacctccgagacaactaccccgag
gagcacgaggcacggtgggccaacgttcaggagttcatcagcctggcaggagatttcatg
cgagatctaagcgcaacggccgatgaagatcgtctcccgcaagtcgacggggttcaacaa
atgcaggagaacgacgctcttgggcgcttcttggccaacgtgtctctggcgtcggacgcc
cagcaaaaaggcgacacggacaacaagccgatggtgaccatctcgaccatccacgcagcc
aagggactggaatggccggtcgtctttgtccctgcggtgtacaatggatctatcccacac
atgaggtcggaagatcctgacgaggagcgccggctcctctacgtggccatgacacgggcc
cagtcgctcctctatctcagctgcccaatgtacagctcgcagaacgggggaaacgggggt
gagcgtactgaattgtcgaaattcattccatcagagatccacccatactttagaaaatgc
ggcccatccttcgagcctgggattctgcaagaaatcgggcgcatactgcgtcgagagtcc
gaggtgccgtcgcaagacaaagtctataaagacatgccgctcctggaacggcccgaggat
aatctgtacccagaggatccggagagctcctttggcgaagcagaagctggtggtagaagc
cggcaatggcagcgacgtcctcggccgcaagcggtttcggcatcggaagagggcgactcc
cagccggtgccgacgtggcatgcttctacgacgatggatggtgcttccaacttcacgctg
cctggcttcacgaccgcaagcgcagcccaggcgatgcttgccgccgcgaaggacatggcg
acctcggcgcagcgcagcgaccaagggcctcaaggatcggctgggcctcggaggggaacg
acaaagcgaccggccgaccagcggagtcttctgggtttcgtcaagaggtccagatccgat
ttgtcagacacagccggccctgtggtcaaccgctcgcccgctgtccagtcacggccggct
cttcaagaactgcccgaactcccgaatctgtaccaggcgcaacgatctgccccgaccatt
gagcctggcctcggcgggcacaggcttggagcaggcaagctccccttcaaaccggggagg
gcagctattggaggcgtcgcgggccccaaaaaacactatgcaaacttttcgagttctcct
cctcggccaaagtctcccgagaaggaaaaccaaagcacagacgagccgccggcggtccga
gagcggccggctagctgtttgcacgcgaccacgacaacgaatggctttgggggcttcaaa
cggcctgctgctttgaagaaggaggggggaattgcgccgatagaccggctgaggaaaccc
ttcaagccgctgacgatgaataggccatga
DBGET
integrated database retrieval system
