Colletotrichum destructivum: 87946367
Help
Entry
87946367 CDS
T10409
Symbol
CDEST_09865
Name
(RefSeq) Putative ribonuclease H-like superfamily, exonuclease, RNase T/DNA polymerase III, oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cdet Colletotrichum destructivum
Pathway
cdet03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
87946367 (CDEST_09865)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdet03019
]
87946367 (CDEST_09865)
03009 Ribosome biogenesis [BR:
cdet03009
]
87946367 (CDEST_09865)
Messenger RNA biogenesis [BR:
cdet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
87946367 (CDEST_09865)
Ribosome biogenesis [BR:
cdet03009
]
Eukaryotic type
Pre-60S particles
RNases
87946367 (CDEST_09865)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
87946367
NCBI-ProteinID:
XP_062782074
UniProt:
A0AAX4IPN2
LinkDB
All DBs
Position
6:complement(join(2194308..2194910,2194996..2195085))
Genome browser
AA seq
230 aa
AA seq
DB search
MNFLNPLKPKAAVPEMQPASDGPLVWIDCEMTGLDPDKEEIIEIFCIITTGNLQVIDPEG
WGCVVHKTEERMAQMDDWCTRTHRDSGLTAAVIQSTTTAEQAAEGLLAYIRKHVPKPKTA
LLAGNSVHADRSFLNKAPYRRVVDHLHHRILDVSSLKEAARRWCPSQVVDGAPAKQGLHQ
AKEDILESIDEAKYYREAIFGLAWRRGDASAQETPVSERDDNEAWADNLL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcctcaacccactcaaacccaaggcggctgtccccgagatgcagcctgcgtcg
gacggaccccttgtgtggattgactgtgagatgacggggctggacccggacaaggaggag
atcattgagatcttctgcatcatcacgaccggaaacctgcaagtgatcgaccccgagggc
tggggctgtgtggtgcataagaccgaggagcggatggcacagatggatgactggtgcacg
cggacgcaccgggacagcggcctgacggcggcggtcatccagtcgacaacgacggcggag
caggcagcagaagggttactcgcctacatccggaagcacgtcccgaagcccaagacggcg
ctgttggccggcaacagcgtgcacgcggaccggtcgttcctcaacaaggcgccgtaccgc
agggtagtcgaccatctccaccaccgcattctcgacgtcagctcgctcaaggaggcggcg
agacgttggtgcccgtcgcaggttgtggatggtgctcccgccaagcagggccttcaccag
gccaaggaggacatcctcgagagcatcgacgaggccaagtattatcgggaggccatcttc
ggattggcatggagacggggagatgccagtgcccaggagacgcccgtaagcgagcgcgac
gataacgaggcgtgggcagataacctgctgtag
DBGET
integrated database retrieval system
