Colletotrichum destructivum: 87946382
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Entry
87946382 CDS
T10409
Symbol
CDEST_09880
Name
(RefSeq) Putative armadillo-like helical, symplekin/Pta1
KO
K06100
symplekin
Organism
cdet Colletotrichum destructivum
Pathway
cdet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
87946382 (CDEST_09880)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdet03021
]
87946382 (CDEST_09880)
03019 Messenger RNA biogenesis [BR:
cdet03019
]
87946382 (CDEST_09880)
Transcription machinery [BR:
cdet03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
87946382 (CDEST_09880)
Messenger RNA biogenesis [BR:
cdet03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
87946382 (CDEST_09880)
U7-dependent histone pre-mRNA processing factors
87946382 (CDEST_09880)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
87946382
NCBI-ProteinID:
XP_062782089
UniProt:
A0AAX4IPP1
LinkDB
All DBs
Position
6:join(2235317..2235660,2235733..2235898,2235953..2236083,2236144..2236347,2236405..2236756,2236805..2237657,2237714..2237844)
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AA seq
726 aa
AA seq
DB search
MAAPSSQASVSDQIRQLNDARKLVLGDVKYYPTVVKSILPIVGPTARVELRRWGADFLAE
AFSTPALPGSEKETMQLFVLDTLQSMVETPNEDPHVLRSAIQTAASIYPFALRWIINNSY
DNLTWERVVAIKTRILQIWSEAESTVRICCIKFAQRVVLAQSVANPSEPRRGDSLDISLD
KIPPNHQTLDVMTLDAEGVGLLDRMLSVLQENSSDVLLVDATLNCLSILIRSRPGTANRI
LTAVLNFNPMKLANSPMTPRTRVIVKSMEKTTRMLLIHLSKRDPHGPMAPRIQQHVERMM
RMRHEIFDESGRKRAFEAQQHAEMDAKRQRVAPQVATTPQIQVTPLPPGPHSLGDVFTLT
GSEGLKAFDVGTLPTAMAAKISITTLIRTDAQLLTMAIEGIQGRLAALAAQPAPQINPET
APLGVEEDDDYEPDFAAAEDNEQILNKLDSDPVARPDDHDLGLRTFKLPPPPALTPELAL
SAGQGSVMSLFQFVKTLEDPGKRSKSGINRLAASTNDRESWIAIITRLASRSSAGLEEVG
NKDETSVSVSGLSLGNSIRDSLYTYVLEDFRRRIDVAITWLHEEWYNDQLQKKQEGNHPL
HYEKWALKLIDGFSQYLNAQDKVLTRFLGEVPELSPAILSRVKLMCRDPLVVPLALTSLL
YLVMMRPPAKELALDTVQDIWTEYEDARPLAAKYLVKFRPSWLASAKAVAEGGGTAATNN
ATAITT
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcagctccatcctcacaggcgtccgtgagcgaccagattcgccagctcaacgacgca
aggaagctcgtcttgggcgacgtcaagtattacccaaccgttgtcaagagcattctgccc
atcgtcggacccacggcgcgcgttgaactccgaagatggggcgccgacttcctggccgag
gccttttcgacgcccgcgctaccgggcagcgaaaaagagacaatgcagctcttcgtgctg
gacacgctgcagagcatggttgagaccccgaatgaggatccccacgtactgcggagtgcc
attcagacggccgccagcatctatccctttgcgctgcgatggatcatcaacaactcgtac
gataacctcacgtgggaacgggtggtcgcaatcaagacacgcattcttcagatatggagc
gaggccgagtcgacggtgaggatatgctgcatcaagtttgcgcaacgagttgtcctcgca
caatcggtggccaacccaagcgaaccaagacgaggtgattcccttgacatttcactcgac
aagatcccgccaaaccatcagacgctagatgttatgaccctcgacgccgaaggagttgga
ttgctggacaggatgttgagcgtgttgcaggagaacagcagtgatgttcttctcgttgat
gccaccttgaactgcctgtccatcttgatccgcagtcggccggggacggccaacagaata
ctgactgccgtgctcaacttcaatcccatgaagctcgcgaactcgcccatgactcccaga
acccgtgtgattgtcaagtccatggagaagacgactcgtatgctcttgatacatctgtca
aaacgcgacccccacggcccaatggcgcctcggattcagcagcatgtggagagaatgatg
cgcatgaggcacgaaatcttcgacgagtccggccgcaaacgggctttcgaagctcaacag
cacgccgagatggacgccaagcgccagcgggtcgcaccccaagtggcgacgacgccgcag
atccaagtcacgccactaccgccaggccctcacagcttaggcgacgtcttcactctcaca
ggcagtgaaggactgaaggctttcgacgtgggcacactcccgacggcaatggccgcgaaa
attagcatcaccacgctcatccgcacggatgcgcaacttctcacaatggcaatcgagggt
attcagggacgactcgccgctctggcagcacaacccgcaccgcaaatcaaccccgagact
gctcctctgggcgtcgaagaggatgacgattacgaaccggatttcgccgccgccgaagat
aatgagcaaattctgaacaagctcgacagcgatcctgtggcccgaccagatgaccacgac
cttgggctgaggacgttcaagctgccgcctccacctgcgctcacgccagaattggcgcta
agcgcgggtcaaggctcagtcatgtccctgttccagtttgtcaagacgctggaagaccct
ggcaaaaggtccaagtctggcatcaaccgactggcggccagtaccaacgaccgagaatcc
tggattgccatcattacccgactggccagccgttcgtcggcaggtttagaggaggtcggc
aacaaggacgagaccagtgtctcagtgtcgggattgtctctcggcaacagcatcagagac
tcgctgtacacgtacgtacttgaggatttccggcgacgtatcgacgtcgccatcacttgg
ttgcacgaagagtggtacaacgaccagctgcaaaagaagcaagagggaaaccatcctctg
cactacgagaaatgggcgctcaagttgattgacggtttctcgcaatacctcaatgcccag
gacaaggtcctcacccggttcctgggcgaggtccctgagctcagccccgccatcctgtct
cgcgtcaagctcatgtgtcgcgatcctttggtggtgcctctggctctgacgagtctattg
tacctggtcatgatgcgaccaccggccaaggagcttgccttggacacggtccaggatatc
tggacagagtacgaggatgcgcgaccactggcggcgaaatacttggtcaagttccggccg
tcctggctagcatcagccaaagcagtagcagagggtgggggtactgcagcaacaaacaac
gcaacagcaatcacaacataa
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integrated database retrieval system
