Colletotrichum destructivum: 87946476
Help
Entry
87946476 CDS
T10409
Symbol
CDEST_09974
Name
(RefSeq) Putative helicase, P-loop containing nucleoside triphosphate hydrolase
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
cdet Colletotrichum destructivum
Pathway
cdet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
87946476 (CDEST_09974)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdet03041
]
87946476 (CDEST_09974)
Enzymes [BR:
cdet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
87946476 (CDEST_09974)
Spliceosome [BR:
cdet03041
]
Complex C
Other components
Step II factors
87946476 (CDEST_09974)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
SLFN-g3_helicase
SRP54
nSTAND3
ATPase
T2SSE
nSTAND_NTPase5
Flavi_DEAD
AAA_30
GAD
ABC_tran
Microtub_bd
TrwB_AAD_bind
Myosin_head
AAA_16
Motif
Other DBs
NCBI-GeneID:
87946476
NCBI-ProteinID:
XP_062782183
UniProt:
A0AAX4IPP2
LinkDB
All DBs
Position
6:2526048..2528978
Genome browser
AA seq
976 aa
AA seq
DB search
MYDNRDGSGPSFKRRRIDGGRFQDSGRSTPRDSRAAETPARDVPEPTDEDSNALDRDWYL
GDEFGGHTFGDDSHNPFVAYASWEAEKQEAVKAEKMSSRFDARKEQRQRENDAWETNRML
VSGVAQRRDMGADFDDEEATRVHLLVHDLRPPFLDGRTIFTKQLEPVPAVRDYQSDMAVF
SRKGSKVVKEARQQRERQRQAQEATNIAGTALGNIMGVKEDDGDSALPVASENDTKKKNG
DEPAENGNSNKFSDHMKKDEGGGSDFSRSKTLREQRQYLPAFAVREDLMRVIRENQVIIV
VGETGSGKTTQLTQFLYEDGFGKSGMIGCTQPRRVAAMSVAKRVSEEMEVKLGSTVGYAI
RFEDCTSKETVIKYMTDGVLLRESLNEPDLDRYSCVIMDEAHERALNTDILMGLFKKILQ
RRRDLKLIVTSATMNAKRFSDFYGGAPEFIIPGRTFPVDVMFHRSPVEDYVDQAVQQVLA
IHVSMDQGDILVFMTGQEDIEVTCELIQRRLDALNDPPKLSILPIYSQMPADLQSKIFDR
AAPGVRKCIVATNIAETSLTVDGIKYVVDAGYSKMKVYNPKMGMDTLQITPISQANASQR
SGRAGRTGPGKAFRLFTEKAFKEELYMQTIPEIQRTNLSNTVLMLKSLGVKDLLDFDFMD
PPPQDTITTSMFDLWALGALDNLGELTPLGRKMSAFPMDPSLSKLLITAEEYGCSEEMIT
IVSMLSVPNVFYRPKERQDEADAQREKFWVHESDHLTYLQVYSAWKSNGCSDGWCIKHFL
HPKSLRRAKEIRDQLLDIMKMQKMEMLSCGMDWDVIRKCICSGYYHQAAKYKGSGEYINL
RTNLGVQLHPTSALYAGHPPDYVVYHELILTSKVYVSTVTAVDPHWLADLGGVFYSVKEK
GYSVRDKRITETEFNRKMEIEAEMAEDKKREEDRLEAEKERSARKKNGLVTAAGGKKIVT
HGAVRKPVIKRRGRGV
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacaaccgagatggatcaggccccagcttcaagcgccggaggatagatggaggg
agatttcaagactcgggccgctcgacaccccgcgactctcgcgccgccgaaacgccagcc
agagacgtcccggaaccgactgacgaagactcgaatgcactggatcgcgactggtacctg
ggcgacgagttcggcggtcatacatttggcgatgactcgcacaatccctttgtggcgtat
gcatcatgggaggccgagaagcaggaggctgtcaaggcggaaaagatgtcgagtcgattc
gacgcgcggaaggagcagcggcagagagagaacgacgcgtgggagacgaatcgaatgcta
gtctccggtgtggcgcagaggagggacatgggcgccgatttcgacgacgaagaggccaca
cgagttcatcttttggtacacgacttgcggccgccttttcttgatggacgaaccatcttc
acgaaacagctggaacccgtgcctgctgttcgtgactaccagagcgacatggctgtgttt
agtaggaagggcagcaaggtggtgaaggaggcgcgtcagcagagggaacgccaacgacaa
gcacaggaggccacgaacatcgccggcacagccttaggaaacatcatgggcgtgaaagaa
gacgacggggacagcgcactgccagtcgcttcggagaacgacacaaagaagaaaaatggg
gacgagccggcggagaatggcaacagcaacaaattcagcgatcatatgaaaaaagacgaa
ggtggcggtagcgatttcagtcgaagcaagacgctgcgcgagcaaaggcagtatcttcct
gcatttgcagtccgtgaggatctgatgcgtgtcatccgggagaaccaggtcattatcgta
gtcggcgagacagggtccggcaagacgactcagttgacgcagtttctctacgaggacggg
tttggaaagtcgggcatgattgggtgcacgcagccgagacgtgtggccgcgatgagtgtc
gctaagcgtgtctctgaggagatggaagtcaagctcggcagcacggtcggctatgcaatt
cgtttcgaggattgtaccagcaaggagactgtcatcaagtacatgaccgacggtgtactt
ctgagagagtcgctgaacgagcccgatctcgacaggtactcttgcgtcatcatggacgag
gcgcacgaacgtgccttgaacacggatatcctgatgggattgttcaagaagatccttcag
agacggcgggatctgaagcttatcgtcacatctgcgaccatgaacgcaaagcggttttcg
gacttttacggcggagcccctgagttcatcatcccgggtcgaacctttccagtcgacgtc
atgtttcacaggtcgccggtcgaggattatgtggaccaggccgttcaacaggtcctggcc
attcacgtatccatggatcagggcgacatcctggtattcatgaccggacaagaagatatt
gaagtcacctgcgagctgatccaacggcggcttgacgccctgaatgaccccccgaagctg
agcatcttgcccatttacagtcagatgcctgcagatttacagtccaagattttcgacaga
gcagcgccaggggtgcgcaagtgcatcgtcgccacgaacatcgctgagacgagtttgact
gttgacggtatcaagtacgtggtggacgccggttacagcaagatgaaggtgtacaatccc
aagatgggcatggataccctccagatcacccccatttcgcaggcaaacgcatcacagcga
tccgggcgtgccggcagaacgggacctggtaaagcctttcgtcttttcactgaaaaggcg
ttcaaggaagagttgtacatgcagacaattccggaaatccagcggacgaatcttagcaac
acagtacttatgctcaagtctctgggcgtcaaagacttgctggactttgatttcatggat
ccgcctccgcaagacactatcacgacgtccatgttcgacctgtgggctctgggtgctctg
gacaatctgggcgagctgaccccgcttggccgaaagatgagcgcgttcccgatggacccg
tcgctgtcaaagcttctcatcacagccgaggaatacggctgcagcgaggagatgatcacc
attgtatctatgctctccgttcccaacgtcttctacagacccaaagaacgccaggatgaa
gcagacgcccagcgcgaaaagttctgggtacacgagtcggaccacctgacgtatttgcag
gtgtactccgcatggaagtcgaacgggtgctccgacggctggtgcatcaaacacttcctc
catcccaagtcgctccgccgagccaaggagatccgcgatcaactgctcgacatcatgaag
atgcagaaaatggagatgcttagctgcggcatggattgggacgtcatccgcaagtgcatc
tgcagcggttactaccaccaggcggccaagtacaagggttcgggcgagtacatcaacctc
cgcaccaacctcggcgtacagctgcacccgacgtctgcgctgtacgcaggccacccgccc
gactacgtcgtctaccacgagctcatcctgacttcgaaggtgtacgtctcgaccgtcacc
gctgtggacccacactggctggccgatctgggtggtgtgttctactcggtcaaggagaag
gggtactcggtgcgggacaagcggattaccgagacagagttcaaccgcaagatggagatc
gaggcggagatggccgaggacaagaagagagaagaggacaggctggaggccgagaaggag
aggtctgcgaggaagaagaacgggctcgtgacggcggccggcgggaagaagattgtcacg
catggggccgtgagaaagcccgtcatcaagcgaaggggccgaggcgtttag
DBGET
integrated database retrieval system
