Colletotrichum destructivum: 87946496
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Entry
87946496 CDS
T10409
Symbol
CDEST_09994
Name
(RefSeq) Putative chromodomain-helicase-DNA-binding protein
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cdet Colletotrichum destructivum
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdet03021
]
87946496 (CDEST_09994)
03036 Chromosome and associated proteins [BR:
cdet03036
]
87946496 (CDEST_09994)
Transcription machinery [BR:
cdet03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
87946496 (CDEST_09994)
Chromosome and associated proteins [BR:
cdet03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
87946496 (CDEST_09994)
SLIK complex
87946496 (CDEST_09994)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
Helicase_C
Chromo
CHD1-like_C
HDA2-3
ResIII
Cdh1_DBD_1
CDH1_2_SANT_HL1
AAA_22
DHR-2_Lobe_C
Motif
Other DBs
NCBI-GeneID:
87946496
NCBI-ProteinID:
XP_062782203
UniProt:
A0AAX4INE0
LinkDB
All DBs
Position
6:join(2607165..2607581,2607638..2607664,2607722..2607809,2607880..2611984,2612033..2612195)
Genome browser
AA seq
1599 aa
AA seq
DB search
MMSSPLEPGPTNGYRSPEGDSPSPVADAGHQSDSDLSDVRDNAARLASPSPSPDPNDSTG
YMNGAPDFAESESSGDENNASDDADFDMDEDAASIVQSDGAGDVHSSSNDSQRPTKRKVA
AREDDFIKANPELYGLRRSSRPTQQRRMVDSSDETDSDVAPTNRRTVKRRRVETSRQSSK
RGTPARQPSTDSDSDSDNYGGARAKSLQKKARRQREAQPSLLLAEKRWSSRRAAQVQQGA
YEESDVDDEEDGSELTPNYYAADVVDDSPYIDKVLRHKLKDGLELSWSSTRNDFEYYIKW
QGKSHLHDTWETAETLRSMRGYRRVENYFRTIVEHELLIRFGEDIPPETKEQFFLDRERS
EEALEDYTKVDRVVAIRDGDDETEYLVKWKGCYYDECTWEVASAIKSDFQDKIDQFLDRS
SRSWVSNRKESNPDTRTRMTKLEAQPDYIKGGELRSFQLRGLNFLCLNWTRANNVILADE
MGLGKTVQSVSFLSWLRNEREQEGPFLIVAPLSVIPAWGDTFDHWSPDMNYVVYLGNETS
RSTIRDNELMVNGNPKKPKFNALITSYEMILQDWQFLQQIKWQALLVDEAHRLKNKESQL
YARLVGFGVPCKILITGTPIQNNLAELSALMDFLNPGKVVIDEELENLAGNDTQEKLQDL
HKSIAPYILRRTKETVESDLPPKTEKIIRVELSDVQLEYYKNILTRNYAALSNATGQKNS
LLNIMMELKKVSNHPYMFAGAEDRVLAGSTRREDQIKGLIASSGKMMLLDQLLTKLKKDG
HRVLVFSQMVKMLDILSDYMALRGYKFQRLDGTIAAGPRRMAINHFNAEDSDDFCFLLST
RAGGLGINLMTADTVVIFDSDWNPQADLQAMGRAHRIGQKKPVSIYRLVSKETVEEEVLE
RARNKLLLEYLTIQAGVTDDGKAFREEMNKKGLKIDGPNSAEDIQLILKMRSQKMFEQSG
NQERLEQLDIDSILENAEITKTKVDDKMNLSSGGIDWDNFMQYTDVKVDDLTLDWDQIIP
ADELAVIKAEEDKRKNEEYVAKVAAESAPRRVTMKNRNETDRSDRLAKKRQREEQQRQEA
EEQRALLSDPKRPLNEKETRNLLKAFFRYGSMEDRGDEIVQEARLAERDRDYLKSILDDF
VKTCEDALNENTARLMDDERKLGKSLTKKDKKAVLVDFGEVRKMNAETAVERPQQLRLLR
QTIRKNDDFKTFRLADATKAAHYSCEWGAREDGMLLVGIDKYGFGAWAQIRDDDQLDMSD
KFFLEEHRIEKKEERIKGAEKVVNSPGAVHLVRRSEYLLSVLQAKHSTDPLAHRAVENHH
RNNKRLANGHRRSDVGSSAASPAPPALKKNGSHRDRERSHGDHHRSRSNADERGTPRPES
KRKHSGHDEGRIPKHRRMEETRRTKSDEQQSPRSDRPRNRDEGERSSKHRRPEDHRHGDE
RRRSSNTPRASQPDSERRNQALRRLDQLRKMGDNKEEREKDADAMLWYLLKPVRGNFEAI
LVTTKERVKSSKERAKIFGEELVVIGNFLDREFVQERDNALKNRFWEFLANLWPVDSTSN
EVTGDRLSAMYRVLQAREVKKHNGDTPAAAPTNGTAATS
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctagccccctcgaacccggtcccaccaacgggtaccggtcgccggagggtgat
tctccctctccagtagccgatgccggtcaccagagtgatagtgatctctcagatgtgcgc
gataatgccgcacgtctcgcttcaccgtcgccgtcgccggatcccaatgactcgaccggt
tacatgaatggcgcacccgacttcgccgaatcagaaagttccggcgacgaaaataacgca
tctgatgatgccgactttgacatggacgaagatgcggcgtccattgtccagagcgacggg
gccggcgacgtccactcgagctctaacgattcccagcggcctacgaagcggaaagttgcc
gctagagaggatgacttcattaaggcaaaccctgagctatacgggttaagaagaagctca
cgtccgacgcagcagcgcagaatggtcgattcctctgatgaaactgattccgatgttgct
cctacgaacaggaggacagtgaagagaagacgcgtcgagacatcaagacagtcttctaaa
cgaggtacacctgcgcggcaaccgtcgacagactctgactccgactctgataactacggc
ggtgctcgcgcgaagagtctccagaagaaggcacgtcgacagcgtgaagcacagccgagc
cttctcctcgccgagaagcgttggtcgagcagaagggctgcccaagtgcagcaaggcgcc
tacgaggagagcgacgtcgatgacgaggaagacgggtctgaactcactcccaactattac
gcggcagacgtagtcgacgactccccatacatcgataaggtcctcagacacaagctcaaa
gatggtctcgaacttagctggagctcaacgagaaatgacttcgagtattacatcaagtgg
cagggaaagtcgcacctacacgatacatgggagacggcggaaactctgcgtagcatgcga
ggttatcgcagggtcgagaactacttcagaaccatcgtggagcacgagcttctcattcgg
ttcggcgaggacatccctcccgaaactaaggaacagttctttttggaccgcgaacgatcc
gaagaagcactggaagactacaccaaagtggacagggttgtcgctatccgcgacggtgat
gatgagaccgagtacttggtcaagtggaagggctgctactacgacgaatgtacgtgggag
gttgcgtcagccatcaagtcagattttcaggacaagattgaccagttcctggatcggtca
tcacgttcatgggtttctaaccgcaaagagtccaatccggatacacggacaagaatgacc
aaacttgaagcacaacccgactatattaagggcggcgaactgcgttcattccagctcaga
ggcctgaatttcttgtgtctcaactggactcgcgccaacaacgttattcttgccgatgag
atgggcctcgggaaaaccgttcaaagcgtctcgtttctcagctggcttcgcaacgagcgc
gaacaagaaggcccgttccttatcgttgcgcccctcagcgtcatccccgcatggggcgat
accttcgaccactggtctccagacatgaattacgtcgtctaccttggcaacgagacttcc
cgcagcaccatccgtgacaacgagttgatggtcaacggcaatcctaagaagcccaagttc
aatgccctcattacctcgtatgagatgattctccaggactggcagtttcttcagcaaatc
aagtggcaggctttgctcgtcgacgaagcccatcgtctgaaaaataaagagtctcaactg
tatgcgagactcgtcggtttcggggtaccgtgcaagatcctgatcacaggcacgcccatt
cagaacaacctggctgagctttcggcactcatggacttcctcaaccccgggaaagtcgtc
attgatgaggaactagagaacctcgctggaaatgatacccaagaaaagttgcaggaccta
cacaagtcaatcgccccttacatcttacgccgcacaaaggagactgttgagtcagatctt
ccacccaagaccgaaaagatcatcagagtcgagctttcggatgttcagctggagtactac
aagaacatccttacgaggaactatgctgctctgtccaatgccacgggtcagaagaactcg
ttgctcaacatcatgatggagctgaagaaagtgagcaatcatccgtatatgtttgccggt
gccgaagacagagtactcgccggcagcacccgtcgggaggaccaaatcaagggcttgatt
gctagcagtggaaagatgatgcttctcgatcaacttctcacgaagctcaagaaagacggc
cacagagtccttgttttcagtcagatggtcaagatgctagacattctcagcgactatatg
gctctccggggctacaaattccaacgtcttgacggcactatcgccgcgggtcctcgccgc
atggcaattaaccatttcaacgccgaggatagcgacgacttttgctttctgctttccacc
agagcaggtggattgggtatcaatttgatgaccgccgatactgtcgtcattttcgactcc
gactggaacccacaagcagatctgcaagcgatgggacgcgcccaccgcatcggacagaaa
aagcctgttagcatttaccgtctggtatccaaagaaactgtcgaagaagaagttctcgag
cgagctcgcaacaagcttctgcttgagtacctcacaattcaagctggcgtcactgatgac
ggcaaggcattccgcgaggaaatgaacaagaagggtctaaagattgatggtccgaactct
gcggaggatatccagttgatcctcaagatgcgctcgcagaagatgtttgagcaaagtggc
aaccaagagcgtctcgaacagctcgacattgactctatcctggagaacgccgaaatcacg
aagaccaaggtcgacgacaagatgaaccttagcagtggtggtatcgactgggacaacttc
atgcagtacaccgatgtgaaggtggacgacttgaccctcgactgggaccagatcattcct
gccgacgagcttgccgttatcaaagccgaggaggataagcgcaagaatgaggagtatgtg
gcaaaggtcgctgctgagagcgctccgcgcagggtaacaatgaagaaccggaatgagacg
gacagatcggaccgtcttgcgaagaagcgacagagggaagagcagcaacgccaggaagcc
gaggaacagcgtgccctgctatctgacccgaaacgcccactcaatgagaaggaaacacga
aaccttctgaaggcttttttccgatacggttctatggaagaccgtggtgacgaaatcgtt
caagaggctcggctcgccgaacgcgaccgcgattacctcaaatcaatactggacgacttt
gtcaagacttgcgaggacgccctcaacgagaacactgcacgtctcatggacgatgagcga
aaacttgggaagtcattgacgaagaaggacaagaaggccgtcctggtcgactttggcgag
gtgcggaagatgaacgccgagacagctgtcgaacgtccgcagcagcttcgcctgctgagg
caaaccattcggaagaatgatgacttcaagacattccgtctcgccgacgcgaccaaggca
gcccactactcatgtgaatggggcgcgcgagaggatgggatgcttcttgttggcattgac
aagtatggtttcggcgcttgggcgcagatacgagacgatgaccagctggacatgtccgac
aaatttttcctcgaagaacatcgcatcgagaagaaggaagagcggatcaagggagctgaa
aaggtggtcaactcccccggtgctgttcatctcgttcgccgctcagagtatttgctctct
gtgcttcaggcgaagcattcaaccgacccgttagctcacagagccgtcgagaaccaccat
cggaacaataagagattggccaacggacatcgtcgcagtgatgtgggcagcagcgcggcg
tcacctgctccgccagcactcaagaagaacggctcgcatcgggatagagagcgcagccac
ggcgaccatcatcgcagccgcagcaacgccgatgagagaggcacgccgcggcctgagtcg
aagagaaaacactcgggccacgacgagggccgcatccccaagcatcggagaatggaagag
acgcgacgcacaaagagcgatgaacagcagtctcctaggtctgacagacctcggaatcgc
gatgagggcgagcgtagcagtaagcaccgtcgcccggaggatcatcggcatggagacgaa
cgcaggcgctcgagcaataccccgcgagccagtcaacccgacagcgagcgtcgcaatcaa
gcacttcgaaggcttgaccaacttcgtaaaatgggagataacaaggaggagagagagaag
gatgcggacgccatgctgtggtatttgctgaagcctgttcgtggaaacttcgaggccatt
ctggttacaacaaaggagagggtcaagtccagtaaagaacgagccaagatctttggcgag
gagctagttgtcattggcaactttctggaccgcgaatttgtccaggagcgagacaacgcg
ctcaaaaaccgcttctgggagttcctggcaaatctatggcctgttgacagcaccagcaat
gaggtgacgggcgatcgattgagtgccatgtatagagtcctgcaggccagagaagtgaag
aagcacaacggagacacgccagcagcggcgccgacgaatggcacagcagccacttcctaa
DBGET
integrated database retrieval system
