Colletotrichum destructivum: 87947335
Help
Entry
87947335 CDS
T10409
Symbol
CDEST_10835
Name
(RefSeq) Putative helicase, AAA+ ATPase domain, Helicase-associated domain, DEAD-box helicase, OB
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
cdet Colletotrichum destructivum
Pathway
cdet03040
Spliceosome
Brite
Enzymes [BR:
cdet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
87947335 (CDEST_10835)
Spliceosome [BR:
cdet03041
]
Complex C
Other components
Step II factors
87947335 (CDEST_10835)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
AAA_22
HA2_N
DEAD
AAA_19
AAA_30
T2SSE
nSTAND3
AAA_16
ABC_tran
PhoH
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
87947335
NCBI-ProteinID:
XP_062783042
UniProt:
A0AAX4IRD2
LinkDB
All DBs
Position
7:951255..954857
Genome browser
AA seq
1200 aa
AA seq
DB search
MDDLLNLELLSLVSKVTSELQNHLGVSDKTLAEFIIAQRVDAEDYDAFKKKLAAMGADFP
PSLVESVDRLVLTMHPKMKGKAQKNGAGAGGSSEDQHHRSTAEKEQIFRGLSVPDKPVAY
DNIGDGVDAIDDTLALLEGLEGKARKEKPDSRKRSRSPDDGREARRKHRGRSRSRERRKR
DKYRSRSRSFDDYENGPSLKQRSKRRNYDNEDDDRFRRAPEPEVDDAPQLHKVYSGHVTG
IKDFGAFVNLHGVRGKVDGLVHISRLVEGQRVNHPSDLLTKGQEVKVKVVNIEGNRVGLS
MKEVDQETGLDLHPEVRISSGANLEALGGGGSRNNNMFDDTPMPPPQHQPRRQKKRMTSP
ERWEIRQLIASGVAKASDYPDLEEDYNATLRGDGELELEQEVDIEVREEEPPFLAGQTKQ
SLELSPIRVVKAPDGSMNRAAMSGTALAKERKELKQQEAEAAAAEDSKVDLSAQWNDPMA
DPDKRKFASDLRNAKSQMGQNKPDAVPEWKRAVAPKDQAFGKRTNMSIKDQRESLPVYAF
RRKFLDAVREHQVMVVIGETGSGKTTQLTQYLAEDGFANHGVIGCTQPRRVAAMSVAKRV
AEEVGTPLGEAVGYTIRFEDKTSPATKIKYMTDGMLQREILVDPDLRRYSVIMLDEAHER
TISTDVLFALLKKTMKRRKDLKVIATSATLDADKFSSYFDGCPIFTIPGRTFPVEILYSR
EPESDYLDAALVTVMQIHLTEPPGDILLFLTGQEEIDTSCEILYERMKALGPNVPELIIL
PVYSALPNEMQSRIFDPAPPGCRKVVIATNIAETSITIDNIYFVVDPGFVKQNAYDPKLG
MDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTIPEIQRQNLSHVIL
MLKAMGINDLLHFDFMDPPPINTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLA
KVLIISVDMKCSAEMLIIVAMLNLPNVFYRPKEKQSQADQKKAKFHDPHGDHLTLLNVYN
SWKQSSYSSPWCFENFIQARSMKRAKDVHDQLVKIMERYRHPILSCGRNTQIVRQALCSG
FFRNAARKDPQEGYKTLIEGTPVYLHPSSALFGKQAEWVIYHTLVLTTKEYMHCTTSIEP
KWLVDAAPTFFKVAPTDRLSKRKKAERIQPLHNKYAGEDDWRLSAQRKGGRGGGGGGTWG
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctcttgaacctcgagcttctgtcgctcgtatcaaaggttacgtctgagctg
cagaaccatttgggcgtctccgacaagaccctcgccgagtttatcatcgcccagcgcgtc
gacgccgaggactacgatgccttcaagaagaaactcgccgccatgggcgccgacttcccc
ccgagtttggtcgagagcgtcgatcgtctcgtattgaccatgcacccgaagatgaagggc
aaggcgcagaagaacggcgccggcgccggcggcagcagcgaggaccaacaccaccgaagc
actgccgagaaggagcagatcttcagaggtctgtctgtgccggataagccagtggcatac
gacaacatcggagacggcgtggatgccatcgacgacactctggccttgttggaaggattg
gagggcaaggcgcggaaagaaaaaccagactcgcgcaagcgcagtcgcagtccagacgat
ggtcgcgaagcgcggcggaaacacagaggtcggtccaggtcaagggaaagaaggaaacga
gacaaataccggtcgcggtctcgatcgttcgacgattacgaaaacgggccttctctgaag
cagagaagcaaacgacgcaactacgacaacgaggacgacgaccggttcaggagggcacct
gaacccgaggtcgacgacgccccgcagctgcacaaggtttatagcggacacgttactggg
atcaaagatttcggagcgtttgtcaacctacacggtgttcgcggcaaggttgacggcttg
gttcacatctcaaggctggtggaaggccaacgggtcaaccatccctctgacctgctgacc
aaaggccaggaggtcaaggtcaaggttgtcaacattgaaggaaaccgggtaggcctttcc
atgaaagaggtcgaccaagagaccggtctggatcttcacccagaagtgaggatatcgtcg
ggagcgaacctggaagcgctgggtggcggcggcagtcgaaacaataacatgtttgacgac
acgccgatgccgccaccgcaacatcagcctcgtcgacaaaagaagcgcatgacatcaccg
gagagatgggagatacgacagttgatcgcatctggtgttgcaaaggcatccgactacccc
gacctggaagaagactacaatgcaaccctcagaggcgacggcgagctggagctggaacag
gaggtcgatattgaggtcagagaggaggagccgccgttcttggcgggtcagacgaagcag
tcactcgagctgtcacccatccgcgttgtcaaggcgccagacggctcaatgaatcgagct
gccatgtcgggcactgcgctcgcaaaggagagaaaggagctcaagcagcaagaggcagaa
gcagcggcggccgaagactccaaggtcgacctctctgcgcagtggaacgacccgatggcg
gaccctgacaagcgcaagttcgccagcgatctacggaatgccaagtcgcagatgggacag
aataagcccgacgctgtgccggaatggaagcgagcggtggcgccaaaggaccaagcattc
ggcaagcggaccaacatgagcatcaaggaccagagagagtctttgcccgtttatgcgttc
cgacgcaagttcttggatgctgtcagggagcaccaggtcatggtcgtcattggagaaacc
ggctcgggcaagacgacgcaactgacgcagtatctcgccgaagacggcttcgccaaccac
ggagtcatcggctgcacacaaccccgacgcgttgccgccatgtccgtcgcgaagcgtgtg
gctgaggaagttggtacccccctcggtgaggctgtcggatacacgattcgttttgaggac
aagaccagcccggcgaccaagatcaagtatatgacggatggtatgctgcagcgtgagatc
ctggttgacccggatctgaggcggtactcggtcatcatgctcgacgaggcccacgaacgc
accatttctacggatgtcttgtttgcgctgctaaagaagacgatgaagcgccggaaggac
ttgaaggtcatcgccacatcagcaacgctggatgccgacaaattctcgtcatactttgac
ggatgccccatttttaccattcccggccgaacgttccctgtcgagatcctctactctcgc
gaaccggagtccgactatctcgatgccgcactggtcactgtcatgcagatccacctcacc
gagcctcctggcgacattctgctcttcttgacaggccaagaagaaatcgacacgtcttgc
gagatcctgtatgagcggatgaaagctctggggccaaacgtcccagagcttatcattcta
ccggtgtactcggcacttcctaacgagatgcagagccgcatcttcgaccctgcacctcct
ggctgccgaaaggtagtcattgccaccaacatcgctgagacctccatcaccattgacaac
atctacttcgtcgtcgaccccggtttcgtcaagcagaacgcctatgacccgaagctcggc
atggactcgcttgtcgtgaccccgatttcacaggcgcaggccaaccaacgtgctggtcgt
gcgggacgtacggggcctggaaaatgcttccgtctctacaccgaggctgcctaccagtcg
gaaatgctgccgacgaccatccccgaaatccagcgccagaatctgtcccacgtcattctc
atgctcaaagcgatgggcatcaacgacctgctgcacttcgacttcatggaccctccgccc
atcaacacgatgctcacggcgttggaggagctctacgcccttagcgcgcttgacgacgag
ggtcttctcacgcgtctggggaggaagatggcggattttccgatggagccgtcactggcc
aaggtgctcatcatctcggtagatatgaagtgctcagccgagatgctcatcatcgtggcg
atgctgaatctgcccaacgtgttttaccggcccaaggagaagcagtcacaagcggaccag
aagaaggccaagttccacgacccgcacggcgaccacctgactctgctcaacgtgtacaat
tcgtggaagcagagcagctactcgagcccgtggtgtttcgagaacttcatccaggcgcgg
tcgatgaagcgggccaaggacgtacacgaccaactcgtcaagatcatggagcggtaccgg
cacccgatcctcagctgcgggcgcaacacgcaaatcgtgcggcaggcgctctgttcgggc
ttcttccgcaacgcggcgcgcaaggacccgcaggagggctacaagacactcatcgagggc
acgccagtgtacctgcacccgagctcggcgctgttcggcaagcaggccgagtgggtgatt
taccacacgctcgtgctgacgaccaaggagtacatgcactgcacgacgagcatcgagccc
aagtggctcgtggacgcggcgccgacctttttcaaggtggcgccgacggaccggctgtcg
aagaggaagaaggccgaaaggatccagccgctgcacaataagtatgcgggcgaggacgac
tggaggctcagcgcgcagcggaagggcgggcgcggcggcggcggcggcggtacgtggggt
tag
DBGET
integrated database retrieval system
