Colletotrichum destructivum: 87947734
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Entry
87947734 CDS
T10409
Symbol
CDEST_11234
Name
(RefSeq) Putative CCR4-NOT transcription complex subunit 9, armadillo-like helical
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
cdet Colletotrichum destructivum
Pathway
cdet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
87947734 (CDEST_11234)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdet03019
]
87947734 (CDEST_11234)
Messenger RNA biogenesis [BR:
cdet03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
87947734 (CDEST_11234)
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Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
87947734
NCBI-ProteinID:
XP_062783441
UniProt:
A0AAX4ISR7
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Position
7:complement(join(2230252..2230435,2230513..2230888,2230948..2231103,2231164..2231557))
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AA seq
369 aa
AA seq
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MMPAQHVYGHHQFNPQADSAWMHQQSNQHHHAQQAAAAASAVQQQQQQQQQQQQQQQQHY
NRLAGGHSTVPSLGNTHAADGGHDNISEDNRRTMAYIADLLNESTREAALLELSKKREQV
PELALILWHSFGVMTSLLQEIISVYTLLNPSQLTAAASNRVCNALALLQCVASHNDTRTL
FLNAHIPLFLYPFLNTTSKSRPFEYLRLTSLGVIGALVKNDSSEVINFLLTTEIIPLCLR
IMETGSELSKTVAIFIVQKILLDDNGLNYICATYERFYAVGTVLSNMVAQLVEQQTARLL
KHVVRCFLRLSDNARAREALRQCLPEPLRDATFSSVLRDDAATKRCLAQLLINLSDNVVE
PTQGQHPGL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgatgccggcacagcacgtttacggacaccaccaatttaatccacaagccgactcggca
tggatgcatcagcagtcaaaccagcaccaccatgcgcagcaagctgctgccgccgcttct
gccgtccagcagcagcagcaacaacaacagcagcagcagcagcagcagcagcagcactac
aatcgactcgctggaggtcactctaccgttccgtcccttggcaacacgcatgctgcggat
gggggtcacgataacatttccgaggacaatcgaaggactatggcctacattgctgacctc
ttgaacgagagcactcgcgaggctgccttattggaactcagcaagaagagagagcaggtt
cctgagctggctctcatcttgtggcattcctttggagtcatgacatcgttgctgcaggaa
atcatttcggtctacaccctgctgaatccttctcagcttacggccgcagcatccaaccgg
gtttgcaatgcgctggcccttcttcagtgcgttgcatctcacaacgacacgcgcacgctg
tttctgaatgcccatatccctctcttcctctatccctttctcaatacgacatcgaaatct
aggccgtttgaatacttgcgattgacgtcactgggcgtcatcggcgctcttgtcaagaat
gactcgtccgaggttatcaacttcctgttgaccacagaaataatccctctatgccttcgt
attatggagacgggctccgagttgagtaagactgtggccattttcattgtgcagaagatt
ctccttgacgacaatggcctgaattacatttgcgccacttatgaacgcttctacgccgtg
ggaactgtcctcagcaacatggtcgctcagcttgttgaacagcaaactgcgcgtttgctt
aagcatgtcgtcaggtgttttctaaggttgagcgataatgctcgagcacgcgaagctctc
cgtcaatgcctccctgagcctcttcgagatgcaactttctcttccgttcttcgagacgac
gcggcaacgaagagatgtctagcgcaactcctcataaatctttcagacaacgtcgtcgaa
ccgacccaagggcaacaccctggcctttga
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