Colletotrichum destructivum: 87947741
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Entry
87947741 CDS
T10409
Symbol
CDEST_11241
Name
(RefSeq) Putative WD40/YVTN repeat-like-containing domain superfamily, Sec13/Seh1 family
KO
K14004
protein transport protein SEC13
Organism
cdet Colletotrichum destructivum
Pathway
cdet03013
Nucleocytoplasmic transport
cdet04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
87947741 (CDEST_11241)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
87947741 (CDEST_11241)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdet03019
]
87947741 (CDEST_11241)
04131 Membrane trafficking [BR:
cdet04131
]
87947741 (CDEST_11241)
Messenger RNA biogenesis [BR:
cdet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
87947741 (CDEST_11241)
Membrane trafficking [BR:
cdet04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
87947741 (CDEST_11241)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
87947741 (CDEST_11241)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
87947741 (CDEST_11241)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WDR55
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Vps41
WD40_Gbeta
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
ASA1
Beta-prop_WDR75_2nd
Beta-prop_SCAP
NBCH_WD40
PPDFL
CFAP251_N
Motif
Other DBs
NCBI-GeneID:
87947741
NCBI-ProteinID:
XP_062783448
UniProt:
A0AAX4ISN7
LinkDB
All DBs
Position
7:complement(join(2246353..2247100,2247170..2247285,2247410..2247454,2247516..2247518))
Genome browser
AA seq
303 aa
AA seq
DB search
MASAQVISNSGHDDMIHDAVLDYYGRRLATCSSDRSIKIFEVEGDSQRLVETLRGHDGAV
WCVSWAHPKYGNILASAGYDGKVFIWREQNNQWQKIFDFALHKASVNTVSWSPHESGCLL
ACASSDGNVSVLEFRDNSFDHVSFPAHGLGVNSVSWAPATAPGSIVSSSPGPGSAGVRRF
VTGGCDNLLKIWVFDSASQSYKQELEPLEGHTDWVRDVAWSPTVLQKSYIASASQDKTVR
IWTSDSSSTGQWTHKILNFDAAVWRVSWSLSGNVLAVSGGDNKVSLWKENLRGEWECVKS
IEE
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcccaggttatatcgaactccggccacgatgatatgattcacgatgccgtc
ctcgattattacggtcgccgactcgcgacgtgctcaagcgaccggagtattaaaatattc
gaagtagagggagattcccagcgactcgtcgagacactcagaggtcacgatggtgccgtt
tggtgcgtttcgtgggcgcaccctaaatacggaaatattctggcctcggctggctacgat
ggcaaggtctttatctggagggagcagaacaaccagtggcaaaagatcttcgacttcgcc
cttcacaaggcctccgtcaacacagtttcgtggtcaccacatgagtcgggctgtctgctg
gcctgtgcctcctcggacggcaatgtcagcgttcttgagtttcgcgacaacagcttcgac
catgtcagcttcccagcgcatggcctgggcgtcaactctgtctcgtgggccccagcgacg
gcacccggaagcatcgtcagcagctctcctgggcctggttcggcaggtgtgagacgtttt
gttacaggtggctgtgacaacctgctcaagatctgggtctttgattcagcttcgcagtcg
tacaaacaggaactggagccgctcgagggccataccgattgggttcgtgacgttgcgtgg
tcaccgacagtcctgcagaagtcctacattgcctcagcgtcccaggacaagacggttcgc
atctggacctcggattcatcgagcacaggacagtggacccataaaattctcaacttcgat
gctgccgtctggagagtcagctggtccctgagcggtaacgttctggcagtgagcggcggt
gataacaaggtatcactgtggaaggagaacctccgaggcgagtgggagtgtgtcaagagc
attgaagagtga
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