Colletotrichum destructivum: 87948091
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Entry
87948091 CDS
T10409
Symbol
CDEST_11591
Name
(RefSeq) Putative transcription factor TFIIH subunit p52/Tfb2, transcription factor Tfb2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
cdet Colletotrichum destructivum
Pathway
cdet03022
Basal transcription factors
cdet03420
Nucleotide excision repair
Brite
Transcription machinery [BR:
cdet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
87948091 (CDEST_11591)
DNA repair and recombination proteins [BR:
cdet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
87948091 (CDEST_11591)
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GFIT
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NCBI-GeneID:
87948091
NCBI-ProteinID:
XP_062783798
UniProt:
A0AAX4ITL8
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Position
7:complement(join(3396467..3397739,3397809..3397896,3397994..3398126))
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AA seq
497 aa
AA seq
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MSVSSGQSLQLADYLEKLPGTTFRKLYLQPSTAFAIFRRMIPPLAKTIVMAILYMPKPML
LEDLDVWVKPESRRQKDQAISTLRSLHILQITVPSKERPQEMQLTTNFKSSLRLALEGGG
THNSFGVPSSLPVPPEITVPFLDRYARRKWEDILHYIVNTVNPGGADLGGPKSSVKNLLV
AGQLVRRQGSAVGITQAGFTFLLQEANAQVWTLLLLWLEATDHAEDAAGMESTDMLSFLF
LLASLELGRAYDTNALTEARRNMLPSLLDFGLIYIPSHKPQQYFPTRLATTLTSSSSALR
SAGAGFSAALAAATGPRPPPSNGLTPGGSEEGKGGGSIIVETNYRVYAYGQTPLQIAVLS
LFCKLKLRFADMVSGRLTRNSIRNAVERGITADQIISYLAAHAHEQMHRMAAVRSRPVLP
PTVVDQIRLWQLETERMTTTSGFLFRDFDSPKEYEDIAGYAAEIGVLVWRNDKLGMFFAS
KHEQIRDYLKLRKKAED
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcagctcgggtcaatcgctccagctggccgactacctggagaagctgccgggc
acgacgttcaggaaactctacctgcagccctcgacggcctttgccatcttccgaagaatg
attccgccgttggcaaaaaccattgtcatggccattctctacatgccgaagcccatgtta
ttggaagatttggacgtctgggtcaagccggagtcgcgaaggcagaaagaccaggccatc
tcgacgctccgcagcctccacatcctccagatcacggtcccttcgaaggaacgcccccag
gagatgcagctcacgacgaacttcaagagctcgctgcgcctcgccctcgagggcggcggc
actcacaactcgttcggcgtgccctcttccctccccgtcccgcccgagatcacggtcccc
ttcctcgaccgttacgcccgccgcaagtgggaggatatcctgcactacatcgtcaacacg
gttaaccccggcggcgccgacctgggcggacctaagtcgtccgttaagaacctgctcgtc
gccggccagctcgtccgccgccaggggtccgccgtcggcatcacccaagccggctttacc
ttcctcttgcaggaggctaacgcccaggtctggaccctgctgctgctgtggctcgaggcc
accgaccacgctgaggacgccgccggaatggagagcaccgatatgctgagcttcctcttc
ctcctcgccagccttgagctcggcagggcctacgacacaaacgcccttaccgaggcgcgc
cgcaacatgctgcccagcctgctcgactttggcttgatctatatcccctcacataagccc
cagcagtatttcccgacccgcctcgcgacgaccctcacgagcagctccagcgcccttcgc
agcgccggcgccggcttctccgccgctctcgccgctgcaaccggcccgcggccccctccc
tccaacggcctcacgccgggcggcagcgaggagggcaagggcggcggcagcatcatcgtc
gagacgaactacagagtatacgcctacggccagactcccttgcagatcgccgtgctctcg
ctcttctgcaagctcaagctgcgcttcgccgacatggtgtcgggccggctgacgcgcaac
tcgatccgcaacgccgtcgagcgcggcatcacggccgaccagataatctcgtacctcgct
gcgcacgcgcacgagcagatgcaccgcatggccgctgtgcgcagcaggcccgtgttgccg
cccaccgtcgtcgaccagatccggctgtggcagctcgagacggagcgcatgacgacgacg
agcggcttccttttccgcgactttgacagccccaaggagtatgaggacatcgccggctac
gccgctgagatcggcgtgctcgtgtggcgcaacgacaagctcggcatgttctttgcgagc
aagcacgagcagattagggactatctcaagctgaggaagaaggctgaggactag
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