Colletotrichum destructivum: 87948650
Help
Entry
87948650 CDS
T10409
Symbol
CDEST_12150
Name
(RefSeq) Putative DNA repair protein Rad50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
cdet Colletotrichum destructivum
Pathway
cdet03440
Homologous recombination
cdet03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
87948650 (CDEST_12150)
03450 Non-homologous end-joining
87948650 (CDEST_12150)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdet03032
]
87948650 (CDEST_12150)
03400 DNA repair and recombination proteins [BR:
cdet03400
]
87948650 (CDEST_12150)
DNA replication proteins [BR:
cdet03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
87948650 (CDEST_12150)
DNA repair and recombination proteins [BR:
cdet03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
87948650 (CDEST_12150)
BRCA1-C complex
87948650 (CDEST_12150)
NHEJ (non-homologous end-joining)
MRX complex
87948650 (CDEST_12150)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SbcC_Walker_B
AAA_21
AAA_29
SMC_N
AAA_13
AAA_16
AAA_22
ABC_tran
Motif
Other DBs
NCBI-GeneID:
87948650
NCBI-ProteinID:
XP_062784357
UniProt:
A0AAX4IVA5
LinkDB
All DBs
Position
8:join(977789..978463,978527..982246)
Genome browser
AA seq
1464 aa
AA seq
DB search
MCAAGGLVILVGKRHHCENRGDLVPWRPNTFFFFLLLAYLILSYLINRCAKSRLFASAVF
ARASLSVPRPRVTSPSCARPSTGDYQRPLQSIPTDCSLVQGSSQHCSTGITQLSTSIRQD
PPGFGFFLDVDTGNFTQRYHSHPLDSHGNWLREAPPAMSKIDKLSVQGIRSFGGSRETIS
FYTPLTLIVGYNGSGKTTIIECLKYATTGEQPPNSKGGAFVHDPKLCGEKEVLAQVKLAF
TSTSGHKCVSTRSLQLTVKKNSRSLKTLEGSLVYNNNGERTVISSRVAQMDEFIPRELGV
SRAILDYVIFCHQDESLWPMSEPAALKKQFDQIFEAMRYTKAIDNLKVLRKKQGEELAKL
KIFEEQDRINKEKGDRAEKRSMALQNDIEESREKCNALTLEMEQLQEQIREKHEQANSYL
NIVNDLKFKRDQLTYREGSIADIKMTLEELSEDDEYLENALAQYEERMTRYGEEADENKA
QYAELQKDLNQSRRELSTKLAEQGKHQSDKDKYERQLQSRMQLVRDAAELHGFRGYDGDL
KDAQIKTFNERIQKLLVEKKRDLDRAQKENARELDEATSVITDLEGRKATTTQNRVFAKQ
RMGAIDKRTNVLQMDINRLDIDEGAKAILDSQFEDLESRLKKANESLAHADFDNQLQREN
EKLWQLETENEKLGRELMECTRLASERAQLDLRKKELSDRKRKLETLTNTWKPKLDVHVG
TEWQTDTLEAQFHDALKRQNKVVADARQKRDSARDKQQKVDFKLKSAKDVGAKKMDESQR
CRSAVVAALQAVRDGATIDDYEEEVKMHEEDVETYTTDISLLDALADYYRGCQKTLQEKN
KCRLCDRSFDDKSNVSKSRFSDKLVKFLDPNKKEKAEEDLANSTALLNALRKVKKQYETY
QRLITELPSVKEEVASLEAECETLGRQLEEHDAVVSAEEGKLNDIESLNKTVINITQAVK
DIKDSEAQVDRIMSQQSSGTVSRSADEIHELQASCNEQIRSTKNKLSKTTSDRQRMKDQV
NALELEKSELRNKLSKALNQLERKKDFQSQIQTLKEDQAHQRELISQADQELESIEPEIA
EARSIRDDTLQRGRAKEQAIAEERDKVADSVTELKMVESDIRDYIDRGGPSNLAANQRAI
ASLEKSIAALDKEISDLTVRTNKLKQDIDNGDRKKQNISNNLKYRQNLQQLEILRRDIEE
LESRDADEDYKSLITEAKQLENRHNRLVADRGSIMGQMKTKDEELERLLLEWEQEYKSAA
KKYRESHIKVETTKAAIEDLGRYISALDTAIMRYHSLKMEEVNRIAGELWQSTYQGTDID
TILIRSDNENATTGRRSYNYRVCMVKQDTEMDMRGRCSAGQKVLASIIIRLALAESFGVN
CGLIALDEPTTNLDKDNIKSLAESLHAIIKARQAQSNFQLIVITHDEEFLRHMRCSDFCD
SFFRVRRDDKQNSVITKESITRVL
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgctgcaggcggcctagtcatcctggtcggtaagcgccatcactgtgaaaacaga
ggggacttggtgccctggagaccgaacaccttcttcttcttcctcttgttagcttatctt
atcttatcttatctcataaaccggtgcgcgaagtcacgccttttcgcatctgctgtcttt
gcgcgtgccagtctcagcgtcccaagaccacgcgtcacatccccatcctgtgcacgtccg
tccaccggcgactatcagcgcccacttcaatcgatacccactgactgcagcctggtgcaa
ggcagcagccagcactgctcgacgggtatcacacaattgagcacaagtatacgccaagat
cccccaggcttcggtttctttctcgacgtcgataccggcaatttcacacaacgatatcat
tcccatcccctcgattcgcatggcaattggctccgagaggcaccgcccgccatgtccaaa
atcgacaagctgtccgtccagggcatccgctcttttggaggcagtcgcgaaaccatctca
ttctacacgccattgaccctcatcgtcggatacaatggctccggaaagactaccattatc
gagtgtctcaagtacgccactaccggcgagcagccccccaacagtaagggcggcgctttc
gttcatgaccctaagttgtgcggcgagaaggaggttttggcacaggttaagcttgcattc
acttcgaccagtggccacaagtgcgtttccacgcgcagcctgcagttgaccgtcaagaaa
aactcccgatctctcaagacccttgaaggatcactggtctacaataacaatggcgagcgc
accgtcatctcatccagagtcgctcagatggacgaattcatcccgagagagcttggcgtt
tcgagagccatccttgactacgtcatcttctgccatcaggacgagtctttgtggcccatg
agtgagcccgccgccttgaagaagcagtttgaccagatattcgaagcgatgcgatacacc
aaagccatcgacaacctcaaggtcctcaggaaaaaacagggcgaggagctagccaagctc
aagatctttgaggaacaagaccgaatcaacaaggagaagggtgatcgtgctgagaagcgc
tccatggcgttgcagaacgacatcgaggagtcccgtgaaaagtgcaacgcgctcaccctt
gagatggaacagctgcaggagcagattcgcgaaaaacacgagcaggccaacagctacttg
aacatagtcaatgacctcaagttcaagagagaccagcttacctaccgcgaaggctccatt
gccgatatcaagatgacactggaggaactttcggaggacgacgaatacctggagaatgcg
ctggcgcagtatgaggagcgcatgacccgctacggcgaggaggcagacgagaacaaggct
cagtatgccgagctgcagaaggacctcaaccaatctcgccgcgagctttctaccaagctt
gcagagcagggcaaacatcagtccgacaaggacaagtatgaacgtcagctccagtctcgc
atgcagctggtccgggatgctgctgagctccacgggttccgtggctatgatggtgacctc
aaggatgcgcagatcaagaccttcaacgaacgcattcagaagttgctggttgagaagaag
cgtgacctagatcgagcgcagaaggagaacgcgcgagagctggacgaggcgacaagtgtc
atcacggatctcgagggccgcaaggcaacgacgactcagaaccgcgtcttcgccaagcag
cgaatgggtgccattgataagcgaaccaacgtcttgcagatggacattaaccgtctggac
atcgacgagggtgccaaggccattcttgacagtcagtttgaggatctcgagagccggctg
aaaaaggcgaacgagtccttggcccatgccgacttcgacaaccagcttcagcgagagaac
gagaagctgtggcagctcgaaaccgagaatgagaagcttggacgcgagttgatggagtgt
acgaggcttgcctctgagcgggcgcagctcgacttgcgaaagaaggaactgtcagatcgc
aagcgcaaactcgaaacccttaccaacacatggaagcccaagctggacgtgcatgttggc
accgaatggcagacagacaccctcgaggcccagttccatgacgccctgaaacgtcagaat
aaagttgtcgccgacgctcgccagaagcgtgactcggcaagggacaagcaacagaaggtg
gacttcaaattgaagagtgctaaagatgtcggtgccaagaagatggacgagtcacagcgc
tgccgcagtgcggtcgtcgctgctctgcaggctgtccgagatggtgccactatcgatgac
tacgaggaagaggtcaagatgcatgaagaagacgtggagacatacaccactgacatcagt
ctcttggacgccctagcagattactaccgcggctgccagaagacgctgcaggagaagaac
aaatgccggctctgcgaccgcagctttgatgacaagtcgaatgtctccaagtcccgattc
tcggacaagctggtcaagttccttgatcccaacaagaaggagaaggcagaggaagacctc
gccaattccactgccctgcttaatgctctgcgcaaggtcaagaagcagtacgagacctac
cagagactgataacagaactcccgtctgtgaaggaagaggttgcctctctggaggccgaa
tgtgaaactctgggacggcagttggaggagcacgatgccgtcgtcagcgccgaggaaggc
aagctgaacgatatcgagtctctcaacaagacagtcatcaatatcacccaggcagtcaag
gatatcaaggactcggaggcgcaggttgacagaatcatgtctcagcagtcatccggcacg
gtcagcagaagtgcagacgagattcacgagctgcaggcgtcctgtaatgagcagatcaga
tcgacgaagaacaagctttccaagacaacgtcagatcgccagcggatgaaggatcaggtc
aacgcgctcgaactcgagaaaagcgagcttcggaataagctgagcaaggctctcaaccaa
ctggagcgcaaaaaggacttccagagtcagatccagaccttgaaggaggatcaagctcat
cagcgggagttgatcagccaagccgaccaggaactggaatccatcgagccagaaatcgcc
gaggctaggtcaattcgagacgacaccttgcagcgtggccgtgccaaggagcaggccatt
gccgaggagcgggacaaggttgccgactctgttacggagctgaagatggtcgagagcgat
attcgagactacatcgaccgtggcggcccctccaacctggcggcgaaccagcgggctatc
gccagtctcgagaaatcgatcgctgctctagacaaggagatatctgacttgactgtgcgc
accaacaagttgaagcaggatatcgacaacggcgaccgcaagaagcagaacataagcaac
aacctgaagtaccgccagaacctgcagcaacttgagatcctccgccgggatattgaagaa
ctggagtcccgcgacgccgacgaggactataagtcgctgatcaccgaagcgaagcagctg
gagaaccgccacaaccggctcgtcgcggaccgcggctccatcatgggtcagatgaagacc
aaagacgaggagctcgagcggctcctgctggagtgggagcaagagtacaagagcgctgcc
aagaagtaccgcgagtcgcacatcaaggtcgaaacgaccaaggcagccattgaggacttg
ggtcgatacatctcggcactggacacggccatcatgcggtaccacagcctgaaaatggag
gaggtcaaccgcatcgccggcgagctgtggcagagcacgtatcagggcacggacattgac
acgattcttatccgctccgacaacgagaacgcgacgacgggccggcgctcctacaactac
cgcgtctgcatggtcaagcaggacacggagatggacatgcgcggccgctgctcggcgggc
cagaaggtgctcgccagcatcatcatccgcctcgccctcgccgagagctttggcgtcaac
tgcggcctcattgccctcgacgagccgacgactaatctcgacaaggacaacatcaagagc
cttgccgagagcctgcacgccataattaaggcccgtcaggcccagagcaacttccagctc
atcgtcatcacccacgacgaggagttcctgcgtcacatgcgctgcagcgacttttgcgac
agcttcttccgcgtccgaagggacgacaagcaaaacagcgtcatcacaaaggagagcatc
acgagggttttgtaa
DBGET
integrated database retrieval system
