Colletotrichum destructivum: 87948921
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Entry
87948921 CDS
T10409
Symbol
CDEST_12421
Name
(RefSeq) Putative RNA-binding motif protein
KO
K12876
RNA-binding protein 8A
Organism
cdet Colletotrichum destructivum
Pathway
cdet03013
Nucleocytoplasmic transport
cdet03015
mRNA surveillance pathway
cdet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
87948921 (CDEST_12421)
09122 Translation
03013 Nucleocytoplasmic transport
87948921 (CDEST_12421)
03015 mRNA surveillance pathway
87948921 (CDEST_12421)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdet03019
]
87948921 (CDEST_12421)
03041 Spliceosome [BR:
cdet03041
]
87948921 (CDEST_12421)
Messenger RNA biogenesis [BR:
cdet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
87948921 (CDEST_12421)
Spliceosome [BR:
cdet03041
]
Complex C
Other components
EJC/TREX
87948921 (CDEST_12421)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RecQ5
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
87948921
NCBI-ProteinID:
XP_062784628
UniProt:
A0AAX4IWF5
LinkDB
All DBs
Position
8:join(1857370..1857639,1857735..1858019)
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AA seq
184 aa
AA seq
DB search
MADVEMEIDNPPSPSAAAAAVGGEAAPARNESEMQTHGRATAVRSIEGWIIMVTNVHEEA
DEEAIHDMFGEFGEIKNLHLNLDRRSGYVKGYALIEYATLAEARAAIDSAHETKLLDQTV
YVDFAFVRPPPGSKGGSGGGNRGGAGARPQNRGRGRSRSRSRSRSVDREAAAAAAAAKDS
GDIE
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtggaaatggaaattgacaaccccccctccccctctgccgccgccgccgcc
gttggaggcgaggccgcccccgcccgtaacgagtctgagatgcagacacacggccgcgcc
actgccgtccgctccattgagggctggattatcatggtcaccaacgtccacgaggaggcc
gacgaggaagccatccatgacatgtttggcgagttcggtgagatcaagaacttgcacctc
aacctcgaccggaggagtggttacgtaaagggctacgcacttatcgagtacgccaccctt
gccgaggcccgcgccgccatcgactcggcccatgagaccaagcttctcgaccagaccgtt
tacgtcgacttcgccttcgtccgccccccgcccggcagcaagggcggcagcggcggcggc
aaccgcggtggagccggtgcgagaccccagaaccgcggccgcggccggagtcgcagccgc
agccgcagccgcagcgtcgacagggaggcggcggcggcggccgccgccgctaaggacagc
ggcgacattgaatga
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integrated database retrieval system
