Colletotrichum destructivum: 87950162
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Entry
87950162 CDS
T10409
Symbol
CDEST_13662
Name
(RefSeq) Putative tex-like protein, HTH domain superfamily
KO
K11292
transcription elongation factor SPT6
Organism
cdet Colletotrichum destructivum
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdet03021
]
87950162 (CDEST_13662)
03036 Chromosome and associated proteins [BR:
cdet03036
]
87950162 (CDEST_13662)
Transcription machinery [BR:
cdet03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
87950162 (CDEST_13662)
Chromosome and associated proteins [BR:
cdet03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
87950162 (CDEST_13662)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HTH_44
HHH_7
YqgF
Spt6_S1
Tex_central_region
SPT6_acidic
HHH_9
SH2
HHH_3
DUF7800
Motif
Other DBs
NCBI-GeneID:
87950162
NCBI-ProteinID:
XP_062785869
UniProt:
A0AAX4IZC5
LinkDB
All DBs
Position
9:join(1785935..1786099,1786154..1786327,1786380..1790007,1790068..1790327)
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AA seq
1408 aa
AA seq
DB search
MSNSMRDFVDGEAEIDDEDEESIDEDVVSSRRRNAAPEDSSEEEEDDEDEEEARKIREGF
IVDEDEEEEEGEDEDAHERKRKREHRDREEEEQLDEDDLELIGEQIERRAPTQPKFKRLK
RGHRDEDDRGPERRGLEDMFSDDDEEANESRPYNRSNYRSQADEFDDFIEEDYPEDEDER
ARQLEDAEVARPRDKGVGGVVDTAGLDKDALEDMEAIFGNGEDYDWALQMEDEEEDRERE
EQVIELKDVFEPSQLKEKLLTDEDNQIRFTDEPERFQLDRKPFKHLQISAEQFKEEARWI
AGLMWPKKLLQSELHGPFTKAIGKVLEFFVVDDVEVPYVFQHRKDYLIHAKKTKNPDHRD
DPDAPEWIVSADKLLTQDDLWRILELDIKFRSLIEKRNALEKTLENLKSTSSFKDAVLED
MIPQAATMEELQDLQDYLHFQYASELKDMSSINGNGSQMKRPGSKSNLFDRVRRSKAFGF
VRAYGITPDRFAQNTLREGNKVWADDDSQLPDDLADSLTDEEFQTGDTVMYAARQMYAEE
LFVNPRMRKHFRVNFYQMGEISCRRTEKGLKKIDESHPFYEVKYLINQTIADVARQPDLY
LKMMKAEEEGLIEVKLTLENDDGFKRQLRQEFISDNYSELADRWNEERQKVLDLVVPRLS
KIIAKGVKESLRTACQEEVLKTCREEYSKRLDQAPYKPKGMILGTVPRIITLSNGMADPA
RDPTCWASVEEDGRVIEQGKLGNLARDERAREEFVEIVNRRRPDAIGVSGWSADTQKLVR
DLESLISEKGLMGPEFDDPELGEYRTEPLEVIVVNDEVARLYKDSPRAVAEHPTLSSLTR
YCIALAHYMQNPLKEYAALGKDVTSLAFHPCQNLLPQEKLLKHLESAMVDMVNLCGVNIN
EAVGDSYTANLLPYVAGLGPRKATSVIKAINANGGAVSSRDELVGDPDSGKLPVVGPRVW
NNCASFLFIDYDATNPTSDPLDNTRVHPEDYELGRKMAADALELDEEDVKAETDHNGPGA
IVRKLFKEDEQEKVNELILEEYAEQLERNYSQRKRATLETIRAELQAPYEELRRNFAPLG
PHDIFTMFTGETKDTLAQGMIIPVNVRVVKDDFAIVKLDCGIEGRIESHDGPDGVRVRGL
LTNGQTVQAKVLEINYKDFLAKLSARDAEVKRPYKRPLYHGHGQWDERLEAADREELREK
DKSTGRTQRVIKHPLFKPFNGLEAEQWLGTQAAGEVIIRPSSKGNDHLAITWKVADGVFQ
HVDVLELQKETEFSVGKLLRVGGKFTYKDLDELIHEHIEAMSRKVDEMMQHKKFEKRSKT
DLEKWLTTYMEANPDRSDYAFCIDPKHPGYFWLCFKASRSSRVNSWPVRVIPGGFELLKQ
AYPDMRALCNGFKIRYQTEITKMQKGGR
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactcaatgcgagatttcgtcgatggcgaggctgagatcgacgatgaggatgag
gagtccatagacgaagacgtggtttcttcgcgcagaaggaatgcggctccggaggattct
tctgaagaggaagaggacgacgaagacgaggaggaggcgcgtaaaattcgcgaaggattt
attgtggatgaggacgaagaggaggaagaaggtgaggacgaggatgcccacgaacgaaag
cgaaaacgagagcaccgcgacagagaagaggaagagcagctagatgaggacgacttggag
ctaatcggagaacaaatcgaacgccgtgcacccacacagcctaagttcaagcgtctcaaa
cggggccatcgcgacgaagatgaccgtggcccggagcgacgcggcttggaggacatgttt
tctgatgacgacgaagaagccaacgagtctcgaccctacaaccgctccaactaccgatca
caagccgatgaattcgacgactttattgaagaagactacccggaagacgaagacgaacgc
gcgcgccaacttgaagatgccgaggttgcccgacctcgtgacaagggtgtgggaggtgtc
gtcgataccgctggtcttgacaaagacgctttggaggatatggaggccatcttcggaaac
ggagaagactatgactgggctcttcagatggaggacgaagaagaagatcgtgagcgcgag
gagcaggtcattgagctcaaagatgtcttcgagccgtcgcaactcaaggagaagctcttg
accgacgaggacaaccagatccggtttacggacgagcctgaaaggttccagctggatcgg
aagccctttaagcacttgcaaatcagcgctgagcaattcaaggaagaggctcggtggatt
gcgggcctgatgtggcccaaaaagctactccaatccgagctgcatggacctttcactaag
gccatcggcaaggttctggagttcttcgtcgtcgatgacgtggaggtcccctatgttttc
cagcatcgcaaggactatctgattcacgcgaagaagacgaaaaacccagaccaccgcgat
gatcccgacgcccctgagtggattgttagtgcagacaaattgctcacccaggacgatctg
tggcgcatcctggaactcgacatcaagttccggtcgctcatcgagaagcggaatgctctg
gagaagacgctcgagaacctcaagtcgacttcgagcttcaaggacgccgtgctcgaggac
atgattcctcaggctgcaacaatggaggaactgcaagaccttcaagactaccttcatttc
cagtacgcctccgagctcaaggacatgtcctcgatcaacggcaatggtagtcagatgaag
cgcccaggctcaaaatcaaatcttttcgacagagtcaggcggagcaaggccttcggtttc
gtccgcgcttacggtatcactccggatcggttcgcccaaaacacgcttcgcgaagggaac
aaggtttgggccgacgacgacagccaacttcccgacgatcttgccgactctcttaccgat
gaggagtttcaaactggcgatacagtcatgtacgctgctcgccaaatgtacgcagaagaa
ctcttcgtcaaccctcgtatgcgcaagcatttcagggtcaacttttaccaaatgggcgag
atcagttgtcgtcggacagagaagggcttgaagaagattgatgaatcgcacccgttctat
gaggtcaaatatctcatcaatcaaaccattgccgatgtcgctcgccagccggatctatat
ctcaagatgatgaaggctgaagaggagggcctcattgaggtcaagcttacattggagaac
gacgatgggttcaagcgccaattgcgccaggagttcatctcagacaactacagtgagctc
gctgatcgctggaacgaggaacgccaaaaggtcctcgaccttgtcgtcccccgcttgtcc
aagatcatcgccaagggtgtcaaggagtcgcttcgcactgcctgccaggaggaggtcctc
aaaacctgccgtgaggaatactccaagaggctcgaccaagcaccgtacaaacccaagggc
atgattctgggcacggtgcctcgcatcatcactttatccaacggcatggcggatccagct
cgtgaccccacatgttgggcctcggttgaggaagacggccgggtcattgagcagggcaaa
ctgggcaatctggctcgtgacgaacgtgctcgtgaagagtttgttgagattgtcaataga
cgccgccctgatgccattggtgtgagcgggtggtccgccgatacccagaagctcgtcaga
gacttggagagcttgatcagcgagaagggcctgatggggcccgagttcgatgaccctgag
cttggcgagtaccgcaccgagccgctcgaagtaattgttgtgaatgacgaagtggctcgt
ctatacaaggacagtcctcgagcggtcgccgagcaccctaccctcagttccctcacaaga
tactgcattgccttggctcactacatgcagaacccgctcaaggagtatgcggccctcgga
aaggacgtcacttccctggctttccatccctgtcaaaacctgctgccacaagagaagttg
ctcaagcaccttgagtcggcaatggtcgacatggtcaatctctgcggtgtaaacattaac
gaggccgtgggcgactcctatacggctaacctgctaccgtatgtcgcgggtctcggtccc
cgaaaagccacgagtgttatcaaagccatcaatgcaaacggcggagccgtcagcagcaga
gacgagcttgtcggcgaccccgacagcggaaagcttccggtggtgggccccagagtgtgg
aacaactgcgccagctttctgttcatcgactacgacgcaacgaatcccacctcggaccct
ctcgacaacactcgtgttcatcccgaggattacgagctgggccgcaagatggcagctgac
gctttggaacttgacgaggaagatgttaaggcggagactgatcacaacggtcctggggct
attgtccgcaagctgttcaaggaagacgaacaggagaaagttaacgaactcatcctggaa
gaatacgcagagcaactcgagcggaactacagccagaggaagcgcgccacacttgaaacc
atccgcgctgagcttcaggcgccgtacgaagagttgcgccgcaactttgcacctcttgga
cctcacgatatattcaccatgttcaccggtgagacgaaggatactcttgctcaaggcatg
atcatccctgtcaacgtacgcgtagttaaagacgatttcgctatcgtcaaactggactgc
ggcatagagggccgtatcgagtcacacgatggtcccgacggcgtacgagtcaggggtctt
ttgacaaatgggcagacggtgcaggccaaggttctcgagataaattacaaagactttctt
gccaagctctctgcgagagatgccgaggtcaaacgaccgtataagcgcccgctgtaccat
ggccatgggcagtgggacgagaggctggaggcggcggacagggaggagctccgcgaaaag
gacaagagtactggccgcactcagcgagtcatcaagcaccctctgttcaagcctttcaac
ggtttagaggcagagcaatggctcggcacccaggccgctggcgaggttattattcgtccc
tcctcaaagggtaatgatcatctagctatcacctggaaggtcgccgatggtgtctttcag
cacgttgatgtccttgagctccaaaaggagaccgagttctccgttggcaagctgctgagg
gtcggcggcaaattcacctacaaggatttggacgagttgatccatgagcacatagaggct
atgtcaaggaaggtggacgagatgatgcagcataagaagtttgagaagcggtccaagacg
gatctcgagaaatggctcaccacgtacatggaggccaaccctgaccgctccgactacgct
ttctgcatcgaccctaagcaccccggctacttctggctctgcttcaaggccagtcgctca
tcgcgtgtcaactcgtggcccgtccgtgtcattcccggcggttttgagctgctcaagcag
gcttaccccgatatgagagcgctatgcaacggctttaagattcggtaccagacggaaatc
accaagatgcagaagggcggtagatag
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integrated database retrieval system
