Colletotrichum destructivum: 87950205
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Entry
87950205 CDS
T10409
Symbol
CDEST_13705
Name
(RefSeq) Putative replication factor A protein
KO
K07466
replication factor A1
Organism
cdet Colletotrichum destructivum
Pathway
cdet03030
DNA replication
cdet03420
Nucleotide excision repair
cdet03430
Mismatch repair
cdet03440
Homologous recombination
cdet03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
87950205 (CDEST_13705)
03420 Nucleotide excision repair
87950205 (CDEST_13705)
03430 Mismatch repair
87950205 (CDEST_13705)
03440 Homologous recombination
87950205 (CDEST_13705)
03460 Fanconi anemia pathway
87950205 (CDEST_13705)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdet03000
]
87950205 (CDEST_13705)
03032 DNA replication proteins [BR:
cdet03032
]
87950205 (CDEST_13705)
03400 DNA repair and recombination proteins [BR:
cdet03400
]
87950205 (CDEST_13705)
Transcription factors [BR:
cdet03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
87950205 (CDEST_13705)
DNA replication proteins [BR:
cdet03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
87950205 (CDEST_13705)
DNA repair and recombination proteins [BR:
cdet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
87950205 (CDEST_13705)
MMR (mismatch excision repair)
87950205 (CDEST_13705)
DSBR (double strand breaks repair)
HR (homologous recombination)
87950205 (CDEST_13705)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
DUF116
Motif
Other DBs
NCBI-GeneID:
87950205
NCBI-ProteinID:
XP_062785912
UniProt:
A0AAX4IZM8
LinkDB
All DBs
Position
9:join(1944810..1944847,1944909..1945163,1945221..1946654,1946708..1946804)
Genome browser
AA seq
607 aa
AA seq
DB search
MDVESKITKGALDAIFNDPEGANVKFPVPVLQCLQIKPLAAQTGGGAERYRIVLSDVNNY
VQCMLATQVNHVIHENKLVRNCIVRITQYQANSVKGKNILIILGLEVIEQLGTPDKIGEP
QAFEAKPPAPANTTIGGQNFYGVKQEETKPKPQQSIPSRSAGGATGQHGSSNIYPIEALS
PYAHKWTIKARVTQKSDIRTWHKPSGEGKLFSVNLLDESGEIKATGFNEQVDQYYDLLQE
GGVYYISSPCKVQLAKKQFTNLPNDYELTFERDTQIEKAEDQSNVPQVRFNFCNIQELQE
VEKDATVDIIGVLKDVDEVSQIVSKSTGKPYEKRELTLVDDTNYSVRVTIWGKSATNFDA
KPESVVAFKGTKVSDFGGRSLSLLSSGTMSIDPDIPDAHRLKGWYDSSGRNDTFSNHNNM
VSMGNATGRKDQDKSILQVKEENLGMEQQDYFNLKATIVYIKQDNFAYPACMNEGCNKKV
TETGEGAWRCEKCDVSHPKPEYRYIMSVNVCDHTNQLWLSCFDDVGRVIMGMSADQLTNL
REEDETKMAQAFEDANCRKLNFRCRAKMDTFGESQRVRYQVMSASPIDYKAEGAKLADLI
KQFGISS
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgaatcgaagattacgaaaggtgccttggacgccatcttcaacgaccctgaa
ggggccaacgtgaagttcccggtgcccgttcttcagtgcctgcagatcaagcccttggcc
gcccaaacaggaggtggtgctgagagataccgcattgtgctgagtgatgtcaacaactac
gtacagtgcatgctggccacgcaagtgaaccacgtcatacacgagaacaagctggtcagg
aactgcatcgtgcggatcacccagtaccaggcaaactccgtcaagggaaagaacatcttg
atcatccttggcctcgaggtcattgaacagttgggcacaccagacaagattggcgagccc
caagccttcgaagcaaagcctcccgcgcctgcgaacacaaccattggcggacaaaacttc
tacggcgttaagcaagaggagacgaagcccaagccccaacaatcgataccctcgcgctct
gctggaggagcgaccggccaacacggcagcagcaacatctaccccatcgaagccctctct
ccctacgctcacaagtggaccatcaaagcccgtgttacacaaaagtcggacattcggaca
tggcacaagcctagtggcgagggaaagctcttcagtgtgaacctgctcgacgagagtggt
gagatcaaggcaaccggcttcaacgagcaggtcgaccagtattatgatcttctccaggag
ggaggcgtctactatatttccagcccctgcaaggtccaacttgccaaaaagcaattcaca
aacttgccgaacgactacgagctcacattcgagcgcgatacccagatcgagaaggctgag
gaccagagcaatgttcctcaagtgcggtttaacttctgcaacatccaagaactccaggag
gtcgagaaggatgcgaccgtggatatcattggcgttttgaaggacgttgatgaggtgtcc
caaattgtctccaaatcgactggcaagccctacgagaagcgcgagctcaccctcgtggac
gacacgaactactccgtgcgcgttaccatctggggtaagagcgccactaactttgacgcc
aagcccgagtctgtggtggcattcaagggcaccaaagtgtcggactttggtggccgtagt
ctcagtctcctttcttcgggcactatgtctatcgaccccgatattcccgatgcccaccgc
ttgaagggctggtacgactcttctggccgtaatgacaccttcagcaaccacaacaacatg
gtcagcatgggaaatgctactggtcgcaaggaccaggacaagtccattctccaggtgaag
gaagagaacctcggcatggagcaacaggactacttcaacctcaaggctaccattgtctac
atcaagcaagacaacttcgcctaccccgcgtgtatgaacgagggctgcaacaagaaagtc
actgagacgggtgaaggggcttggcgttgcgagaagtgtgacgtctcccaccccaagccc
gagtaccgttacatcatgtccgtcaacgtgtgcgatcacacgaaccagctgtggctcagc
tgcttcgacgatgtcggccgcgttatcatgggcatgtcggctgatcagcttacgaacctg
cgggaggaggacgagacaaagatggctcaggctttcgaggatgcgaattgccgcaagctc
aacttccgatgccgtgccaagatggataccttcggcgagtctcagagggtacgctaccaa
gtcatgagcgcgagcccgattgattacaaggccgagggagccaagcttgcggatctcatc
aagcagtttggtatcagctcgtaa
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integrated database retrieval system
